Serratia sp. AS12: SerAS12_4677
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Entry
SerAS12_4677 CDS
T01502
Name
(GenBank) protein of unknown function DUF853 NPT hydrolase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
srs
Serratia sp. AS12
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srs03400
]
SerAS12_4677
DNA repair and recombination proteins [BR:
srs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SerAS12_4677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
AAA_22
ResIII
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_16
AAA_19
TrwB_AAD_bind
T2SSE
DEAD
AAA_30
AAA_7
AAA_28
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEF52722
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Position
complement(5041852..5043378)
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AA seq
508 aa
AA seq
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MSEARIIAKAMKDGKPVQDLAILPALANRHGLITGATGTGKTVTLQRMAEQFSRIGVPVF
LSDVKGDLSGIGAEGVPSEKLQARLSAIGVSDWQPQACTLIPWDIYGEKGHPIRATVSDL
GPLLLGRLLDLNDVQSGVLQLVFKIADDNALLLLDMKDLRAMVQYVGDNAKQFQTQYGNI
SSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGIINLLAADKLINQPKLY
SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGV
GIYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAQTLRANPTFDAETAITE
LGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGLNSAINKSPLYGRYEDMVDRE
SAYEKLSSEGFATVGSPQPGQQAQQPQAQQQAGGGLMGGLNEILFGSTGPRGGKRDGIVQ
TAAKSMARDLGRQILRGVLGSIMGGRKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcacggattatcgccaaagcgatgaaggacgggaaaccggtacaggatctg
gcgatcttgcccgctttggcgaaccgccatggcctgattaccggcgcgaccgggaccggt
aaaaccgtgacgctgcaaagaatggccgagcagttttcgcgcatcggcgtaccggtgttc
ttgtctgacgtgaaaggcgatctgtcggggattggcgcggaaggcgtgccctccgagaag
ctgcaagcgcgcctgtcggcgattggggttagcgactggcagccgcaagcctgcaccctc
attccctgggatatctatggcgagaagggccacccgatccgtgctaccgtttccgatctg
gggccgctgctgttggggcgcttgctggatctgaacgatgtgcaaagcggcgtgctgcaa
ctggtattcaaaatcgccgacgacaatgcgctgttgttgctggacatgaaagacctgcgt
gccatggtgcaatacgtgggtgacaacgccaaacagttccagacccagtacggcaatatc
tcttctgcctcggtcggcgctatccagcgcggcctgttgacgctggaggagcagggcgcc
aatcagttcttcggcgagccgatgctggacatcaatgatttgatgaaaaccgacgccaac
ggccacggcatcattaacctgctggcggcggacaagctgatcaatcagccgaagctgtat
tcggtgttcctgctgtggctgctggccgaattgttcgaacatctgccggaagtgggcgac
ccggaacagccgaagctggtgttcttcttcgacgaagcgcacctgctgttcaatgacgcg
ccggcagcgctgctgaccaaaatcgagcaggtggtgcgcctgatccgctccaaaggcgtc
ggcatctattttgttacccaaaacccgttggatatcccggacagcgtgcttggtcagttg
ggtaaccgcgtgcagcatgccctgcgcgcctttactcctcgcgatcagaaagcggtgaaa
gccgcagcgcaaaccctacgcgccaacccgactttcgacgcggaaacggcgatcaccgaa
ttgggcgtgggcgaggcgctggtgtcattcctcgacgagaaagggcggcctaacgtggtg
gagcgtgcgatggtgatcgcgccggagtccaaaatgggcatgctgggggctgaagggcta
aacagcgcaattaacaagtcaccgctgtatggccgctacgaggatatggtcgatcgcgaa
tcggcttatgagaagctgtcgtcggaagggttcgccaccgtcggcagcccgcagccgggc
cagcaggcgcaacaaccgcaggcgcaacagcaggcgggcggtggcctgatgggcggcctg
aacgaaattctgttcggctccaccggcccgcgcggcggcaagcgcgacggtattgtccag
accgccgccaagagcatggcgcgcgatctcggccgccagatcctgcgcggcgtgctgggc
tcgatcatgggcggccgtaaaaagtaa
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