Serratia sp. AS12: SerAS12_4934
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Entry
SerAS12_4934 CDS
T01502
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
srs
Serratia sp. AS12
Pathway
srs00540
Lipopolysaccharide biosynthesis
srs01100
Metabolic pathways
Module
srs_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
srs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SerAS12_4934
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
srs01005
]
SerAS12_4934
Enzymes [BR:
srs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SerAS12_4934
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
SerAS12_4934
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
SerAS12_4934
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
SerAS12_4934
Lipopolysaccharide biosynthesis proteins [BR:
srs01005
]
Lipid A
SerAS12_4934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
AEF52978
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Position
5339465..5340742
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AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWAERYGFCAGKVVPGGIMLHSVSVGE
TLAAIPLVRALRHRYPYLPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGSMRRFLDQ
VNPKLVIIMETELWPNLINALHQRQIPLVIANARLSARSAAGYKKIGGFVRDMLRRITLI
AAQNQEDGERFIELGLKRSQLTVTGSLKFDISVTPELAARAITLRRQWAPRRPVWIATST
HEGEETILLAAHRKLLEKHPDLLLILVPRHPERFSTAKELVQKAGFSYTLRSSGEIPSGS
TQVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHIFNFKDICA
KLSQAEGLITVADEDSLVKEVATLLTDEDYRRYYGRHAVEVLYQNQGALQRLLQLLEPHL
PPRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgtttatatcaggtactactctacctcatccaacccctgatctggctccgc
ttactgctgcgcagccgcaaagctccagcctaccgtaaacgctgggcagaacgctatggc
ttctgcgccggaaaagtggtgccgggcggcatcatgctgcactccgtctccgtgggggaa
acgttggcagccatcccgttggtccgcgcgctgcgccaccgctatccttatttaccgatt
actgtgaccacgatgacgccaactggttcagagcgcgttcagtccgctttcggtaaagac
gttcatcatgtttatctgccttacgacctgcccggctccatgcgccgtttcctcgatcag
gtgaaccccaagctggttatcatcatggagaccgagctatggccaaatctgattaacgcg
ctgcatcagcgtcagatcccgctggtgatcgccaacgcgcgcctttccgctcgctctgcc
gccggttataaaaaaatcggcggttttgtccgcgacatgctgcgccgcattacgctaatc
gccgcgcaaaatcaggaagatggcgaacgctttatcgaacttggcctgaaacgctcacag
ctgaccgtgaccggcagcctgaaattcgacatttccgtcactcccgagctggctgcacgt
gcgatcacgttacgccgccaatgggcaccgcgtcgcccggtgtggatcgcgaccagcact
catgaaggtgaagaaaccattctgctggcggcacaccgcaagctgctggaaaaacatccc
gacctgctgctgatcctggtgccgcgtcaccctgaacgtttctctaccgccaaagaactg
gtgcagaaagccggtttcagctacaccctgcgcagcagcggtgaaatcccctccggcagt
acccaggtagtgattggcgataccatgggcgaactgatgctgctgtacggcattgccgac
ctggcctttgtcggcggcagcctggtggaacgcggcggacataacccgctggaagccgcc
gcacacgccattccggtgctgatggggccgcatatcttcaactttaaagatatctgcgcc
aagttatcacaggccgaagggctgattaccgtggccgacgaggactcgctggtcaaggaa
gtcgccactctgctcaccgacgaagactatcgccgctattacggccgccacgccgtggaa
gtgctgtatcagaatcagggagcgctgcagcgcctgctgcaactgttggaaccgcacctg
ccgccacggagccattaa
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