Segniliparus rotundus: Srot_0864
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Entry
Srot_0864 CDS
T01238
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
srt
Segniliparus rotundus
Pathway
srt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Srot_0864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_0864
Enzymes [BR:
srt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Srot_0864
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Srot_0864
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Srot_0864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ADG97341
UniProt:
D6ZE61
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All DBs
Position
852392..853243
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGLAEHLTGARIRALRVLHPRSARRHPGGGAFLAAALSERDVRAVRRRG
KYLWLVLDDEESVVIHLGMSGQFRVGDQGVPGNPAHLRVEADLADGRTLQFFDQRTFGGW
EFAALQEVDGELVPAPVAHIARDPFDPKFDPAAVARRVRAKRSAIKRVLLDQTVLSGVGN
IYADESLWRARLHGEQPAAGLSPRKTAELLDALAVVLGESITEGGTSFDSLYVNVNGESG
RFSDWLAVYGQEGKPCRRCGSAIRREAFMNRSSHYCPRCQRLP
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactccccgaggtcgaggttgttcgtcgagggctcgcggagcatctcacgggc
gcgcgaatccgcgcgctgcgcgtgctgcacccccgttctgcgcgccgccatcctggcggg
ggagcgttcttggccgccgcgttgtcggaacgcgacgtccgggcagtgcgccgccgcggc
aaatacttgtggctggtcttggacgacgaagagtccgtggtgatccacctcggcatgagc
gggcagttccgggtgggcgaccagggagtcccagggaaccccgcgcacctgcgcgtcgaa
gcagatctcgcggacggccggacgctgcaattcttcgaccagcggaccttcgggggatgg
gagttcgccgcgctgcaagaggtcgatggcgaactggtccccgcgccggtcgcgcatatc
gcccgcgaccctttcgacccgaagttcgatcccgccgccgtcgcgcggcgcgtccgcgcc
aaacggtcggcgatcaagcgggtcttgctggaccagaccgtgctttccggcgtcggcaac
atctacgcggacgagtcgctgtggcgggctcggctgcacggcgaacagccggccgcgggg
ctgagcccacgcaaaaccgcggagttgttggacgctctcgccgttgtgctgggcgagtcg
atcaccgagggcggcacgagctttgactccctgtatgtgaacgtgaacggcgaatcaggc
cggttctcggactggctggcggtgtacgggcaggaaggcaagccgtgccgccgttgcgga
tcggcgattcggcgcgaggcgttcatgaaccggtcctcgcattactgcccccggtgtcag
cgcctgccgtga
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