Segniliparus rotundus: Srot_0877
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Entry
Srot_0877 CDS
T01238
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
srt
Segniliparus rotundus
Pathway
srt03030
DNA replication
srt03430
Mismatch repair
srt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Srot_0877
03430 Mismatch repair
Srot_0877
03440 Homologous recombination
Srot_0877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srt03032
]
Srot_0877
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_0877
Enzymes [BR:
srt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Srot_0877
DNA replication proteins [BR:
srt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Srot_0877
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Srot_0877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_14
Mg_chelatase
AAA_16
Rad17
AAA_19
ABC_tran
AAA_28
AAA_18
RNA_helicase
TsaE
ORC-CDC6-like
DnaX_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADG97354
UniProt:
D6ZE74
LinkDB
All DBs
Position
complement(865219..867213)
Genome browser
AA seq
664 aa
AA seq
DB search
MALYRRYRPERLDQVLGQEHVTKPLSVALEAGRLGHAYLFSGPRGCGKTSLARILARSVN
CEKGPTANPCGVCESCRALAEGGPGSIDVIELDAASHGGVDDTRDLRDRAFYAPARSAKR
VFIIDEAHMVTTAGFNALLKIVEEPPPHLIFVFATTEPEKVLPTIRSRTHHYPFRLLPPK
TLRELLANVAHAEQVAVEPDVYPLVIRASGGSPRDALSILDQLMAGAENATVTYADAVGL
LGVTNAALIDSAVAALAAGDGAAVFTAVDQCVSAGGDPRRFAVDLLDRLRDLILVQTVPG
ALEQGLVDAPADAWPQRHEQARSFGPGTLARCAQTLHTGVTEMRGATSPRLLLEVVFARM
LLPQTDSDALIARLERLERGSPLPAAVEPSPARRRAAEPGSLARSERAEPEPETPKPTPR
AQPPAQRQEPETDPWPPRATSEPAGEKPDEPAPESAAVPAPEPVDAPEPVSARADTTDSL
HEIWAKALGQIRERSRVAYALLEGVPTPELRGEELVIRQASSALAARLSDPKVLDMVTTA
LQEGAGVHWRVVCERGAAANASPSERPERSASSAPAASAAEPPSARARRVLAERRSGSAA
REPGADPDPAPRREQTPPQREQAPSPDEQGAPQAQQAPSPDETAQPPDALALLTAQLGAK
PIKG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttgtaccgaagataccggccggaacggctcgaccaggtcctggggcaggagcac
gtcaccaaacccctgagcgtcgcgctcgaagcgggcaggctcggccacgcgtatttgttc
tccggcccgaggggttgcgggaagacgtccctcgcccgcatcctcgcccgttcggtgaac
tgcgaaaaagggccgacagcgaatccttgcggggtctgcgaatcgtgccgggccctcgcc
gaaggcggccccggctccatcgacgtcatcgagttggacgccgccagccatggcggcgtg
gacgacacgagggacctgcgcgaccgcgcgttctacgctccggcccgctccgccaagcgc
gtgttcatcatcgacgaggcgcacatggtcaccacagcgggcttcaacgcgctgctcaag
atcgtcgaagagcctcccccgcatctgattttcgtgttcgcgaccaccgagccggaaaag
gtcctgccgactatccgctcgcgcacccaccactacccgttccgcctgctgccgccgaaa
acgctgcgcgagcttttggccaatgtggcgcatgccgagcaggtggccgtggagccggac
gtgtatccgctcgtcatccgcgcttccgggggctcgccgagggacgcgctctcgatcctc
gaccagctcatggcgggcgcggagaacgcgacggtcacgtacgcggacgcggtgggcctg
ctgggggtcacgaacgccgcgctcatcgacagcgctgtggcggccctcgccgcaggcgac
ggcgcggccgtgttcaccgcggtggaccagtgcgtcagcgcaggtggcgaccccagacgt
ttcgcagtcgatctcctcgaccggctccgggacctcatcctcgtccaaacggtccccggc
gcgttggagcaggggctcgtcgacgcgcctgcggacgcctggccgcagcgtcacgagcag
gcgcgcagcttcggcccaggcaccctcgccagatgcgcccagacgttgcacaccggcgtc
accgagatgcgcggcgcgacctcgccgaggctcctgttggaagtggtgttcgcccggatg
cttttgccgcagacggactccgacgcgctcatcgccagactcgaacggctcgaacggggc
tctcccctgcccgccgccgtcgaaccatccccggcgcggcggcgcgcggcagagccgggc
tccctggcccgttctgagcgagctgagccagagcctgaaacaccgaaaccaacgccgcgg
gcacagccgcccgcgcagcggcaggagcccgaaacagacccttggccaccgcgtgcgaca
tcggaaccggcaggagaaaagccagacgaaccagctcccgagagcgcggccgtccccgcg
cccgaacccgtcgatgcgcccgaaccggtcagcgcgcgggctgacacgacggactccttg
cacgagatctgggcgaaggcgctcggccagatccgtgaacggtcgcgagtcgcatacgcc
ctgctcgaaggcgtgccgactccggagcttcgcggcgaggaactcgtgatccgccaagcc
tcatccgctctcgccgcgcggctgtccgaccccaaggtgctcgacatggtgacaacggcg
ctgcaggaaggcgccggggtgcattggcgggtggtctgcgaacgaggcgcggctgccaac
gcctcgccgtccgagcgacccgagcggtcggcctcatccgctcctgccgcatccgccgcg
gaaccgccgtccgcgcgggcgcgccgcgtgctcgcggagcggcggtcggggtcggcggcg
agggagccgggggccgaccccgatcctgcgccccggcgcgaacaaacacccccccaacgc
gaacaagcgccgtcgccggacgaacaaggagcgccccaggcccaacaagcgccgtcgccg
gacgaaacggcgcagccccccgacgcgctggctttgctcaccgcgcaactcggagccaaa
ccgatcaaaggatga
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