Segniliparus rotundus: Srot_0947
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Entry
Srot_0947 CDS
T01238
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srt
Segniliparus rotundus
Pathway
srt00300
Lysine biosynthesis
srt00470
D-Amino acid metabolism
srt01100
Metabolic pathways
srt01110
Biosynthesis of secondary metabolites
srt01120
Microbial metabolism in diverse environments
srt01230
Biosynthesis of amino acids
Module
srt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Srot_0947
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Srot_0947
Enzymes [BR:
srt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Srot_0947
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF6894
Motif
Other DBs
NCBI-ProteinID:
ADG97420
UniProt:
D6ZEP6
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Position
928138..929064
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AA seq
308 aa
AA seq
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MVCDPAPSVPALFREAVPFVKGHGTQNDFVLIADPDAQLSLGVETVALLCDRRAGIGGDG
LIRAARAGALRASGAIAQLPDGVGDEDWFMDYRNADGGVVEMCGNGARVFAHFLRALGLE
PRGDYAIGTRAGAKRVRLLSFDGGGAEVSVEMGRVRLGGPSATSVAGAPRGCFSGTSADV
GNPHLVCLAQGLDLDGLAALDLTRQPDYDKAVFPEGVNIEFVVPHSPDKATLRVHERGVG
ETKACGTGSVAAAAVVLAELGSGSGEVVVASPGGVVQAYVGPDGSAVLRGPSALVARGEF
DKAWLQQR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcgacccggcgccgtccgtcccggctttgttccgcgaagcggtgccgttcgtg
aagggccacgggacgcagaacgattttgtgctgatcgcggacccagacgcccagttgagc
ctcggcgtggagactgtggcgctgctctgcgaccggcgggccgggatcggcggggacggc
ctcatccgcgcggcgcgggcgggggcgttgcgcgcctcgggcgcgatagcgcagctgccc
gacggggtcggcgacgaggactggttcatggactaccgcaacgccgacggcggcgtggtc
gaaatgtgcggcaacggcgcccgcgtgttcgcgcatttcctgcgcgctctcgggcttgag
ccccgcggcgactacgcgatcggcacccgcgcgggggccaaacgggtccggttgctctcc
ttcgacggcggcggggccgaagtctcggtcgagatgggccgggtgcgcctcggcgggccc
tcggccacctctgtcgcgggcgcgccgcgcggttgcttctctggcacttcggcggacgtc
ggaaacccgcatttggtgtgtcttgcgcaagggctcgacttggacggtctcgcggccctc
gacctgacccgtcagcccgactacgacaaggcggtgttccccgagggcgtgaatatcgag
ttcgtggtgccgcattcgcccgacaaagccaccctgcgtgtgcacgagcgcggggtgggg
gagaccaaggcgtgcggcaccgggtcggtggccgccgccgccgtggtcctcgccgagctc
ggatcagggtcgggggaagtcgttgtcgcctcgccgggcggcgtcgtgcaggcgtatgtc
ggaccagacggctccgcggttctgcgcggcccgtccgcgctcgtggcgcgcggcgagttc
gacaaggcctggttgcaacagcgatga
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integrated database retrieval system