Segniliparus rotundus: Srot_1250
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Entry
Srot_1250 CDS
T01238
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
srt
Segniliparus rotundus
Pathway
srt00730
Thiamine metabolism
srt01100
Metabolic pathways
srt01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Srot_1250
Enzymes [BR:
srt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Srot_1250
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADG97720
UniProt:
D6ZFJ6
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All DBs
Position
complement(1219504..1221162)
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AA seq
552 aa
AA seq
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MTIAAGAQASRRSGHTDPDAHALTLGPLTGSAKQYEQHGELRVPVRRVHLTNGENVDLYD
ASGPYTEDNPAIDLRRGLPKLRDQWSRPGGPFRTQLEHARAGVLTPEMRFIAVREGVAPE
LVLREVAAGRAVIPANRNHPEVEPMVIGKAFRVKINANIGNSAVTSSVAEEVEKMVWATR
WGADNIMDLSTGNDIHETREWILRNSPVPVGTVPIYQALEKANGDPVKLTWELYRETVLE
QCEQGVDYMTVHAGVLLRHVPLTAKRVTGIVSRGGSIMAAWCLAHHQESFLYTHFAELCE
ILRDYDVTFSLGDGLRPGSIADANDEAQFAELRTLGELTKIAKSHGVQVMIEGPGHVPMH
KIVENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAIIAQAGTAMLCYVTPKEH
LGLPNRDDVKAGVIAYKIAAHAADLAKGHPKAQERDDALSKARFEFRWHDQFALSLDPDT
AMAYHDETLPAEPAKKAHFCSMCGPKFCSMRISADIREQAAAHEALIAEGFEQKSREFAE
AGAQVYLPISPV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgcagcaggagcgcaggcctcacgccgcagcggccacaccgacccggacgcg
cacgcgctcacccttgggccgctcaccggcagtgccaaacagtacgaacagcatggcgag
ctgcgcgtgcccgtgcgccgggtgcacctcaccaacggcgagaacgtggacctgtacgac
gcctccggcccgtacaccgaagacaatccggccatcgacctgcgccggggcttgccgaaa
ctgcgcgatcagtggtcccgccccggggggccgttccgcacccagctcgaacacgcccgc
gccggggtcctcacacctgagatgcgtttcatcgccgttcgggaaggcgtggccccggaa
ctggtcctgcgcgaggtcgcggcggggcgcgcggtcattcccgccaaccgcaaccacccc
gaagtcgaaccgatggtcatcggcaaagccttccgggtgaaaatcaacgccaacatcggc
aactcggccgtcacctcctccgtcgccgaagaggtcgaaaagatggtgtgggccacccgg
tggggcgcggacaacatcatggacctctccaccggcaacgacatccacgagacgcgggaa
tggatcctgcgcaactcccccgtgccggtgggcacggtcccgatctaccaggcgctcgag
aaagcgaacggcgacccggtcaagctcacctgggagctgtatcgcgagaccgtcctcgaa
cagtgcgagcaaggcgtggactacatgaccgtgcacgccggagtgctgctgcgccatgtg
ccgctcaccgccaagcgcgtcaccggcatcgtctcgcgcggcggctcgatcatggccgcg
tggtgcctggcgcaccatcaggagtctttcctctacacgcactttgcggagctgtgcgag
atcttgcgcgactacgacgtgaccttctccctcggggacggccttcgacctggttccatc
gccgacgccaacgacgaggcgcaattcgccgagctgcggactttgggcgaactcaccaaa
atcgcgaaatcccacggggtgcaagtcatgatcgaagggcccggacacgtcccgatgcac
aagatcgtggagaacgtccgcttggaggaagagctctgcgaggaggcccccttctacacg
ctcgggccgctggccacggacatcgctccagcatacgatcacatcacctccgcgatcggc
gccgcgatcatcgcgcaagcaggaaccgcgatgctctgctacgtcactcccaaggagcat
ctgggcctgccgaaccgcgacgatgtgaaagcgggcgtgatcgcctacaagatcgcagcc
cacgccgcagacctggccaaggggcaccccaaagcccaggagcgcgacgacgcgctctcg
aaggcccggttcgagttccgctggcacgatcagttcgcgctgtcgctcgacccggacacc
gcaatggcttaccacgacgagacgctgcccgccgagcccgcgaaaaaagcgcacttctgc
tcgatgtgcgggccgaagttctgctcgatgcggatctccgccgacatcagggagcaagcc
gccgcgcacgaggccctcatcgccgaaggcttcgagcagaagtctcgcgagttcgccgag
gcgggcgcacaagtgtatctgccgatcagccctgtgtga
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