Segniliparus rotundus: Srot_1432
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Entry
Srot_1432 CDS
T01238
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srt
Segniliparus rotundus
Pathway
srt03030
DNA replication
srt03430
Mismatch repair
srt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Srot_1432
03430 Mismatch repair
Srot_1432
03440 Homologous recombination
Srot_1432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srt03032
]
Srot_1432
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_1432
Enzymes [BR:
srt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Srot_1432
DNA replication proteins [BR:
srt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Srot_1432
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Srot_1432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADG97895
UniProt:
D6Z7G5
LinkDB
All DBs
Position
1426146..1429685
Genome browser
AA seq
1179 aa
AA seq
DB search
MSDSFVHLHNHTEYSLLDGHAQVDAMFQEAARLKMPAVGMTDHGNMWGSAEFYKASKKHG
VKPIIGIEAYLAPSSRFSTKREFWGEPGQRSDDVSGSGAYTHMTMVAKDAQGLRNLMKLS
SLASFEGQLGKWPRMDAELLAEHGRGVIATTGCPSGEVQTKLRLGQFEAACEAAGRFQEI
FGKENFYLELMDHGIDIERRVREDLLRLGERLKIPPLATNDCHYVRQEHARGHEILLCVQ
TGKTMSDPGRFKFDGDGYYLKPADMMRAAWDSEVPGACDNTLLIAEQVGSYDEVWEVRDR
MPVFPVPDGEDQNSWLRHEVDRGLQRRFPDGVSDEYRARAAFELDVIKQKGFPSYFLIVG
DLIAYARSVGIRVGPGRGSAAGSLVSYALGITNLDPIKHGLLFERFLNPERPSAPDIDID
FDDRRRGEMIRYASEKWGADRVAQVITFGTIKTKAALKDSARVLHGQPGFAIADRITKAL
PPAIMAKDIPLSGITNPEHERYKEATEIRELIANDPDVAKIYETALSLEGLIRNAGVHAC
AIIMSNEPLIETIPLWKRPQDGAIITGWDYPSCEDIGLLKMDFLGLRNLTVIGDAIENIR
QNRGVELDLENAPLDDPATFALLSRGETLGVFQLDGGPMRDLLRRMKPTGFGDIVAVLSL
YRPGPMGVNAHNDYADRKNGRQQIKPIHPELEEPLKEILSETYGLIVYQEQIMFIAQKVA
GYSMGKADALRKAMGKKKLEVLQAEYEGFSQGMRGNGFSEAAVKALWDTVLPFADYAFNK
SHAACYALVAYWTGYLKANYPAEYMAALLTSVGDDKDKAAVYLADCRKMGITVLAPDVNK
SRVDFAAVGEDILFGLSGVRNVGVGLVESIIRTRESEGAFTSFSDYLAKADITACNKKAV
ESLIKAGGFDALGHPRKGLYLVHTEAVDAVMSTKKAEAQGQYDLFSDFFESGSPELTATF
EVQIPDEEWDMKQKLALEREMLGLYVSGHPLAGLEQALAAATDVSIRSILDGEVKDGTNV
KVGGVLSGVNRRVNKNGAPYASAQLEDLVGGIEVFLFPQNYVAYGEEFVEDAVVLINARV
NFRDDRIALIASDVRQAELTPQKAANTLRLSVAESWCNPDSVAQLREILERNPGPTQVLL
DLHRGGKALSFQLDEALTVMPSPELYGDLKALIGPGCLG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggattcgtttgtgcacctgcacaaccacaccgaatactccttgctggacggacac
gcccaggtcgacgcgatgttccaagaagccgccagactcaagatgcccgctgtcggcatg
acggaccacgggaacatgtggggttcggcagagttctacaaggcgtcgaaaaagcatggg
gtcaaaccgatcatcggcattgaggcgtatctggcgccgtcctcgcgtttctccacgaaa
cgcgagttctggggcgagccgggccaacgctccgacgatgtgtccggctccggggcctac
acccatatgactatggtcgcgaaagacgcccagggccttcgcaacctcatgaagctctcc
tcgctcgcctctttcgaaggacagttgggcaaatggcctcggatggacgcggagctcctc
gccgagcacggcaggggcgtcatcgccaccaccggatgcccctccggcgaagtgcagacc
aaactccgcctcggccagttcgaggctgcctgcgaggctgcggggcggttccaggaaatc
ttcggcaaggagaacttctacctcgagctcatggaccacggcatcgacatcgagcgccgg
gtccgcgaggacctgctgcgcctgggcgagcggttgaagatcccgccgctcgccacgaac
gactgccattatgtgcggcaggagcacgcccgaggccacgagatcctgctgtgcgtgcaa
accggcaagaccatgtccgaccccggccggttcaaattcgacggggacggctattacctc
aagccggccgacatgatgcgcgccgcctgggacagcgaggtgccgggggcgtgcgacaac
accttgctgatcgcggagcaggtgggcagctacgacgaggtgtgggaggtccgcgaccgg
atgccggtgttcccggtgcccgacggcgaggaccagaactcctggttgcggcacgaggtg
gaccggggcctgcaacggcggttcccggacggcgtttcggacgagtaccgcgctcgggct
gccttcgagctcgacgtcatcaagcagaagggatttccctcctacttcctcatcgtcggc
gacttgatcgcctacgcgcgcagcgtggggatccgagtcggaccaggccgaggctcggcg
gcgggctcgctggtctcgtacgcgctggggatcacgaacctcgacccgatcaagcacggc
ttgctgttcgagcgcttcctcaaccccgagcggccttctgcccctgacatcgatatcgac
ttcgacgaccgcagacgcggcgagatgatccggtacgcgagcgagaaatggggcgcggac
cgcgtggcgcaggtcatcaccttcggcacgatcaaaacgaaagccgcgctcaaggactcc
gcccgtgtgctgcacggccagcccggcttcgccatcgccgatcggatcaccaaggcgctg
ccccccgccatcatggccaaggacatcccgctgtcggggatcaccaacccggagcacgag
cgctacaaagaggccaccgagatccgcgagctcatcgcgaacgaccctgatgtcgcgaag
atctacgaaaccgcgctttcgctcgaggggctgatccgcaacgcgggggtgcacgcctgc
gcgatcatcatgtccaacgagccgttgatcgaaacgatcccgctgtggaaacgcccacag
gacggggcgatcatcacgggctgggactacccctcgtgcgaggacatcggcctgttgaag
atggacttcctcggcctgcgcaacctcacggtcatcggggacgccatcgagaacatccgc
cagaaccggggcgtggaactggatttggagaacgcgccgctcgacgaccccgcgacgttc
gccctcctgtcccgcggtgagaccttgggcgtgttccaactcgacggcggcccgatgcgc
gaccttcttcgccggatgaaaccgaccggattcggcgacatcgtcgccgtgttgtcgctg
taccggcccggtcccatgggggtgaacgcccacaacgattacgcggaccgcaaaaacggg
cgccaacagatcaagccgatccatcctgagctggaagagccgctcaaggagatcctctcc
gagacgtacggcctgatcgtctaccaagagcagatcatgttcatcgcgcaaaaggtcgcg
ggctattcgatgggcaaagccgacgcgctgcgcaaagcgatgggcaaaaagaagctcgaa
gtgctccaggccgagtacgaaggcttctcccagggcatgcgcgggaacgggttctccgag
gccgctgtcaaagcgctctgggacacagtgctccccttcgccgactacgcgttcaacaag
tcgcatgccgcctgttacgcgctggtcgcgtactggaccggttacctcaaggccaattat
ccggccgagtacatggccgcgcttctcacctcggtgggcgacgacaaggacaaagcggcc
gtgtatctcgctgattgccgcaaaatgggcatcacggtgctcgcccccgacgtgaacaag
tcgcgagtggacttcgccgcggtcggcgaagacatccttttcggcctctctggcgtgcgc
aacgtgggcgtcggtctggtggagtcgatcatccgcacccgcgagtccgaaggcgcgttc
acgagtttctcggactatctcgcgaaagccgacatcacggcctgcaacaagaaagccgtg
gagtcgctcatcaaggcgggcggcttcgacgcgctcggccatccccgaaaagggctctac
cttgtgcacaccgaggccgtggacgctgtgatgtccacgaagaaagccgaggcgcaaggc
caatacgatttgttctccgactttttcgaatcaggttcgccggagctgacggccacgttc
gaggtccagatccctgacgaagaatgggatatgaagcaaaagctcgcgctggagcgcgaa
atgctgggcctgtatgtctccgggcatccgctcgcgggcctggagcaggcgctcgccgcc
gcgaccgacgtgtcgatccgttcgattctcgacggcgaggtgaaggacgggacgaatgtg
aaggtcggcggggtgctttccggcgtgaaccgccgggtgaacaaaaacggggccccgtac
gcgagcgcccagctcgaagacctggtcgggggtatcgaggtcttcctgttcccgcagaat
tacgtggcctacggcgaggagttcgtcgaggacgcggtcgtgctcatcaatgctcgggtg
aacttccgcgacgaccggatcgcgctcatcgcgagcgatgtgcgccaagctgagctgacc
ccgcagaaagccgcgaacacccttcggctctcggtcgccgagagctggtgcaaccctgat
tcggtggcccaactgcgggagatactcgaacgcaaccctggccccacacaggtgcttctc
gacttgcaccgcggcggcaaagcgttgtcgttccaattggacgaggcgctcacggtgatg
ccgtccccggagctgtacggcgacctcaaagccttgatcgggcctggctgccttggttga
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