Segniliparus rotundus: Srot_1494
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Entry
Srot_1494 CDS
T01238
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srt
Segniliparus rotundus
Pathway
srt03420
Nucleotide excision repair
srt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Srot_1494
03430 Mismatch repair
Srot_1494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_1494
Enzymes [BR:
srt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Srot_1494
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Srot_1494
MMR (mismatch excision repair)
Other MMR factors
Srot_1494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADG97957
UniProt:
D6Z7M7
LinkDB
All DBs
Position
1491169..1493538
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AA seq
789 aa
AA seq
DB search
MNASEQILQGLNPQQAEAVVHLGAPLCIIAGAGSGKTSVITRRVAWLLAEGHARPGEILA
ITFTNKAAGELKERVGALVGGRMWEMWVSTFHSSCARLLRAEAGPQAGFDQNFTIYDADD
SKRLLAMVAEELELDTNRFPPRMLAAKISDLKNELIAPEAALVGVEDPFDLVLGQVYRRY
QERLALANAMDFDDLIMRAVELLQTNPEAAQRWRGRFRHVLVDEYQDTNHAQYVLIRELV
GAGAGTQVGAETSALTVVGDSDQSIYRFRGATIRNIEEFERDFPNARTVLLEQNYRSTQN
ILSAANAVIAHNQGRREKRLWTQAGDGQQIIGYVADHEHDEASFVATEITELVRSGAKHG
DVAVFYRTNNASRVFEEAFIRHAVPYRVVGGQRFYDRREVRDIIAYLRVIANPSDAVSLS
RIINTPRRGLGDRAQAQIAAWAGSRGQTFWDACQAAAGGAVAALAARSQRAVADFVAMIA
GLRAELAAGDITVGELVARTVERSGYRAVLADSTDPQDGARLENLDELISVAVEYGELVA
AREGGPVADGFAGELRVNLPEADENEGHAKLRDFLEQVSLVADSDRLPEGGSQSGVVTLM
TLHTAKGLEFPVVFVTGLEEGQFPHLRSLGDPVELAEERRLAYVGITRAREQLYVSRSIT
RTLRGSPMTNPPSRFLLEIPPHLVSWRRGGPDQAWAGFTRSDFGSVSAPRAAGNAVSARK
PAAERGARPRPNLRHESFEVGDRVNHDKYGLGTVVACSGHGQAATVTIDFGSAGTMKLML
IGGVPMSKL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctccgagcagattcttcagggtctcaatccgcagcaagccgaggctgtcgtc
caccttggcgcgcctttgtgcatcattgcgggcgcgggatcgggcaagacctccgtcatc
acccgccgggtggcctggcttctggccgaggggcatgcccgccctggcgaaatcctcgcg
atcaccttcaccaacaaggcggcgggagagctcaaggaacgcgtcggggcactcgtgggc
ggcaggatgtgggagatgtgggtctccacgttccactcctcctgcgcgcggcttttgcgc
gccgaggcggggccgcaggcaggtttcgatcagaatttcaccatttacgacgcggacgac
tccaagcggctgctcgccatggtcgcagaagagctcgagctcgacacgaaccggtttccg
ccgcgcatgctcgccgccaagatcagcgacctcaagaacgagctgatcgcccccgaggcg
gcccttgtcggcgtggaagacccgttcgacctggtgctcggccaggtgtaccgccgctac
caggaacgccttgccttggcgaacgccatggacttcgacgacctcatcatgcgggctgtg
gagctgctgcagaccaaccccgaggctgctcagcggtggcggggaaggttccgccatgtg
ctcgtcgacgaataccaggacaccaaccatgcccagtacgtcctgatccgcgagctggtc
ggagccggggcaggcacccaagtcggcgcggagacgtccgctttgaccgtggtcggcgac
tcggaccagtccatttaccgcttccgaggggcgacgatccgcaatattgaagagttcgag
cgggatttccccaacgcccggacagtgctgctcgaacagaactaccgctcgacgcagaac
atcctgtccgccgcgaacgccgtcatcgcgcacaaccaaggcagacgggagaaacggttg
tggacgcaggcgggcgacggccagcagatcatcggctacgtcgccgaccatgagcacgac
gaggcgagtttcgtcgcgaccgagataaccgagctggtgcgatccggggcgaagcatgga
gacgtggcggtcttctaccggacgaacaacgcgtcgcgggtgttcgaagaggcgttcatc
cgccatgccgtgccgtaccgcgtcgtcggcgggcagcgcttttacgaccggcgcgaagtc
cgtgacatcatcgcctacttgcgggtgatcgccaacccctcggacgcggtcagcctctcc
cgcatcatcaacacgcctcgtcgcggcctcggcgatcgcgcccaggcgcagatcgcagcc
tgggcgggctcccgaggccagactttctgggacgcctgccaagccgccgccgggggagcg
gtcgctgccctcgcggcccgctcccagcgggcggtcgccgatttcgtcgcgatgatcgcg
gggttgcgggccgagcttgccgccggagacatcactgtcggggaactcgtcgcgcggacg
gtggagcgcagcgggtatcgagccgtgctcgccgacagcacggacccgcaggacggcgct
cggttggagaacctggacgagcttatttctgttgcggtcgaatacggcgagctggtggcc
gcacgagagggcggccccgtcgcagacggttttgcgggggagttgcgcgtgaacctgcca
gaggcggacgaaaacgaggggcacgcgaaacttcgggactttttagagcaggtctcgctc
gtcgcggattcagaccggctccccgaagggggatcgcagtccggcgtggtgaccctcatg
accttgcacaccgccaaagggctcgagttcccggtggtgttcgtgaccgggctcgaagaa
gggcagttcccccatttgcgctccttgggcgatccggtggagctcgccgaggagcgcagg
ctcgcctatgtcggcatcacccgtgcgcgggagcagctgtacgtcagccggtcgatcacc
cgcacactgcgcggctcgcccatgacgaacccgccttcgcggttcctgctggagatcccg
ccgcatttggtctcctggcggcgcggcgggcccgatcaggcttgggctggtttcacccgc
agcgacttcggctcggtgtccgccccgcgcgccgccggcaacgcggtctctgcgcgcaaa
cccgccgcagagcggggggctcgtccgaggccgaatttgcgccacgagagtttcgaggtc
ggcgaccgcgtgaatcacgacaaatacggtctcggcactgtggtcgcttgcagcgggcac
ggccaagcggccacggtcacgatcgacttcggcagtgcgggcaccatgaagttgatgctg
atcgggggcgtgcccatgtcgaaactgtga
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