Segniliparus rotundus: Srot_1548
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Entry
Srot_1548 CDS
T01238
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srt
Segniliparus rotundus
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srt03016
]
Srot_1548
Enzymes [BR:
srt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Srot_1548
Transfer RNA biogenesis [BR:
srt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Srot_1548
Prokaryotic type
Srot_1548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADG98011
UniProt:
D6Z7T1
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All DBs
Position
1543540..1544454
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AA seq
304 aa
AA seq
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MPGEHSQDPHGLVIVDKPQGMTSHDMVAKARRFFRTRKVGHAGTLDPMATGVLVLGLGKA
TRLLGRLTADEKRYHGTIRLGEQTASDDADGEVVRRASAAGVALDAIMAGIAALTGEISQ
VPPAVSAIKVGGVRAHAAARAGAALELKARQVVVRRFELVAERKLIGADGAELWDLDVEV
DCTAGTYIRSLARDLGAGLGVGGHLSRLRRVASGPFTITQARCLASLEADPSCSMTLDEA
ARAAFAARDLSADQTRDLGHGKKIPAAGVAGEYAGFSPEGSLVALLEERDGKACPTAVFQ
PAGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtgaacacagccaggacccgcacggactcgtcatcgtcgacaaaccccagggc
atgaccagccacgacatggtcgcgaaggcccggcgttttttccgcacccgcaaggtgggg
cacgcggggacgctcgacccgatggccacgggcgtgctcgtgctggggcttggcaaggcc
acccggctgctcggcaggctcaccgcggacgagaagcgctatcacgggacgatccggctg
ggggaacaaaccgccagcgacgacgcggacggggaggttgtgcggcgcgcttcggccgca
ggggtcgcattggatgcgatcatggcggggatcgcagcgctgaccggggagatctcacag
gtgccgcccgctgtttcggcgatcaaggtcggcggggtccgcgcgcacgccgctgcgcgg
gcgggggcggcgttggagctgaaggcgcggcaggtcgtcgtgcggcggttcgagctggtg
gccgagcgcaagctcatcggcgcggacggggccgagctgtgggatctcgacgtcgaggtg
gattgcacggcaggcacgtatatccgatcgctggcgcgggacctcggagcgggactgggc
gtcggggggcatctgagccgtttgcgccgggtcgcgtccgggccgttcacgatcacgcag
gcacgttgtctcgcgtcgttggaagcggacccctcgtgcagcatgaccttggacgaggcg
gcccgggcggcgttcgccgcgcgggacctttccgcggaccagacgcgagatttgggccac
gggaagaagatccccgccgcaggcgtggcaggcgagtacgccgggttcagcccggaaggc
tctctcgtggcgcttctcgaagagcgcgacggcaaggcgtgcccgaccgcggtgttccaa
cctgcgggcggctga
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