Segniliparus rotundus: Srot_2073
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Entry
Srot_2073 CDS
T01238
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srt
Segniliparus rotundus
Pathway
srt00061
Fatty acid biosynthesis
srt00071
Fatty acid degradation
srt01100
Metabolic pathways
srt01212
Fatty acid metabolism
srt02024
Quorum sensing
srt04146
Peroxisome
Module
srt_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Srot_2073
00071 Fatty acid degradation
Srot_2073
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Srot_2073
09145 Cellular community - prokaryotes
02024 Quorum sensing
Srot_2073
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srt01004
]
Srot_2073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srt04147
]
Srot_2073
Enzymes [BR:
srt01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Srot_2073
Lipid biosynthesis proteins [BR:
srt01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Srot_2073
Exosome [BR:
srt04147
]
Exosomal proteins
Exosomal proteins of breast milk
Srot_2073
Exosomal proteins of breast cancer cells
Srot_2073
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADG98528
UniProt:
D6Z998
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All DBs
Position
2096948..2098747
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AA seq
599 aa
AA seq
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MLETRNSTPFFVADSAAVLDVVSERAAQSPGHVFFERRVGGEKHQVTALEFYEQVRKVAK
GLVASGVEHGDRVAICAPTRYEWALLDFAVWAAGAVTTSIYETSSSEQVRWIISDSEAKL
LVVQDAKLLQAHEAVLATIPTLRETLVFDGDPGAVEQLELRGENVPDSELDSRRAQLGAD
KLATLIYTSGTTGRPKGVCLTHRNFLSEVIATQEPIKAMAPKQGRANTAMFLPMAHIFAR
ALTITSMSANVLIEFLSSTATLSEDLQKIQPTILFSVPRVYEKVYDSAKKKAAAGGKEGI
FERASAVAVAYSEAVENGKPGVVLKLQHALFDRLLYSKLRAAVGGKVVGAVSGGAAISPR
LAHFFNGIGVSVYQGYGLTESTAGITFNSPVANRVGSVGKLVAGCSARIADDGEVLLAGP
VVFSEYWRNPEATAGAIEDGWFHCGDLGRIDEDGFLYITGRKKDIIVTAGGKNVAPQVLE
EVLKEHNLVSQGVVVGDGRPFIAALLTLDPEAAASWAAAHGLAEDTPVSELAQNAELKAD
LQKAVDQANKHVSNAEAIKKFAVLPEDFSIEGGTLTPTLKVKRDVVSKQNEAAIEALYS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagacccgcaacagcacgccgttctttgtcgccgactccgccgccgtcctcgat
gtggtgtccgaacgggcggcgcagagcccaggccacgttttcttcgagcgaagggtcggc
ggcgagaaacaccaagtcaccgccttggagttctacgagcaggtgcgcaaagtcgccaaa
ggtctcgtcgcctctggcgtggagcacggcgaccgagtcgcgatctgcgccccgacccgc
tacgaatgggcgctgctggacttcgccgtctgggcggcaggcgcagtcaccacgtcgatc
tacgagacttcctcgagcgaacaagtccgctggatcatttccgactccgaggccaagctc
ctcgtcgtgcaagacgcgaagctgctccaagcgcacgaggctgtgctcgcaaccattccc
actttgcgcgagacgctggtcttcgacggggacccgggcgcggtcgaacagcttgagctg
cgcggcgagaacgtgccggacagcgagctcgactcgcgtcgcgcccagctcggcgcggac
aagctcgccacgctcatctacacctcgggcacaaccggcaggccgaaaggcgtgtgcctg
acccaccgcaacttcctttccgaagtgatcgcgacgcaagagccgatcaaagcgatggcc
ccgaagcagggccgcgcgaacaccgccatgttcctgcccatggcgcatatcttcgcccgc
gcgctcaccatcacctcgatgagcgccaacgtgctcatcgaattcctctcctccaccgcc
acgctgtcggaggacctgcagaaaatccagcccacgatccttttctccgtgccaagggtc
tacgagaaggtctacgactcggcgaagaaaaaagcagccgcgggcggcaaagaggggatt
ttcgagcgcgcgagcgccgtcgccgtcgcgtacagcgaggctgtcgagaacggcaagccc
ggcgtcgttttgaagctccagcacgcgctcttcgaccggctcctctacagcaagctccgc
gcggctgtgggcggcaaggtcgtcggcgccgtgtcgggcggcgcggcgatctccccgagg
ctggcgcatttcttcaacggcatcggggtgagcgtctaccagggctacgggctcacggaa
agcacggcgggcatcaccttcaactcgcctgtggcgaacagggtcggctcggtcggcaag
ctcgtggccgggtgcagcgcccggatcgcggacgacggcgaagtactcctcgccggaccg
gtggtgttcagcgagtactggcgcaatccagaagccaccgccggcgcgatcgaggacggc
tggttccactgcggcgacctcggccggatcgacgaagacggcttcctgtacatcaccggg
cgcaaaaaagacatcatcgtcaccgccgggggcaagaatgtcgcccctcaggtgctcgaa
gaagtgttgaaagagcacaatctggtcagccagggcgtcgtggtcggcgacgggcgcccg
ttcatcgcggcgctgctcaccctcgacccggaagcagcggcttcctgggcagcggcccac
gggctcgccgaggacaccccggtttccgagctcgcgcagaacgcggagctcaaagccgat
ctgcaaaaagcggtcgaccaggcgaacaagcacgtctcgaatgccgaggcgatcaagaag
ttcgccgtcctgccggaggacttctccatcgaaggcggcacgctgactccgactctgaaa
gtcaaacgagacgtggtgtccaaacagaacgaggccgccatcgaggcgctgtactcctga
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