Segniliparus rotundus: Srot_2146
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Entry
Srot_2146 CDS
T01238
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srt
Segniliparus rotundus
Pathway
srt03420
Nucleotide excision repair
srt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Srot_2146
03430 Mismatch repair
Srot_2146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_2146
Enzymes [BR:
srt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Srot_2146
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Srot_2146
MMR (mismatch excision repair)
Other MMR factors
Srot_2146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PhoH
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ADG98598
UniProt:
D6Z9S8
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All DBs
Position
complement(2169177..2170598)
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AA seq
473 aa
AA seq
DB search
MRALLRGLDERQRCAVAAPRGPVRVLAGAGSGKTRVLTRRIAHLVASEQVRPGEVLAVSF
TVRAAGELRARLDALDELAGGELGLAAVRASTFHAAAARQLGHFWPAESRPWQILDRKAP
LISRAAAAAGLSDRGFDCKEAQGEIEWAKASLIGPEQYPQAARARRRAVTSSLEAIADVY
GRYEALKAAAAPRQLDFDDVLLAMIGVAKSSAAAANQLRSWLRCFLVDEFQDVTPLQHEL
LMTWLGARDNVTVVGDPNQTIYSFAGARGAFFAEFARRFPHAALFRLDRDYRSTAQVTDL
ANRLLGAAGDLRGQVPDGPAPRFVGHADEAREATATADEIVGLIRDGVPAREIAVLFRAN
THAARFERALRARGVPTGEGGVSLCSLHAAKGLEWEAVFLVGLVEGVLPLGWASAAGADA
VAEERRLLYVGITRARTRLVLSWYCERDGRAARPSRFLAPLRSNGAEKSLIKN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcgctgctgcgcggccttgacgagcgccagcgctgcgcagtggccgcgccgcgc
gggccggtgcgggtgctcgccggagccggatcaggaaagactcgggttctgaccaggcga
atcgcgcatttggtcgcctcggagcaagtccgccccggcgaggtgctcgcggtgagtttc
actgttcgggcggcgggcgagctgcgcgcgcgcctcgacgcgctcgacgagctcgcgggg
ggcgagctcgggcttgcggcggtccgcgcgtccacgttccacgccgccgccgcccgccag
ctcggccacttctggcctgccgagtcgcgcccatggcagatcctggaccggaaagcgccg
ttgatctcgcgagctgccgccgcggccggactgtcggaccgagggttcgactgcaaggag
gcccaaggcgagatcgaatgggcgaaagcctcgttgatcgggcccgagcaataccctcag
gcggcccgcgcgcgacgcagggccgtcacatcgagcctggaggcgatcgccgacgtctac
ggccgatacgaggcgctcaaggcggccgccgcgccgcggcagctggatttcgacgacgtg
ctgctcgcgatgatcggggtggcgaagtcgtcagcggccgcggccaaccagctgcgctca
tggctgcgatgcttcctcgtcgacgagttccaagacgtcacgccgttgcagcacgagctg
ctcatgacctggctcggggctcgggacaatgtgacggtggtcggcgaccccaaccagacc
atttactcgttcgccggggccaggggcgcgtttttcgccgagttcgccagacggttcccg
cacgcggccttgttccggctggatcgcgactaccgctccacagcgcaggtgacggatttg
gcgaaccggctgctcggcgctgctggcgacttgcgaggccaagtgcccgacggtccggct
ccgcggttcgtcgggcacgcggacgaggcaagagaggcgacggcgaccgcggacgagatc
gtcggcctgatccgcgacggcgtgcccgcccgcgagatcgccgtccttttccgggccaac
acccacgccgcgcggttcgagcgggcgctgcgggcgcggggggtccccaccggagagggc
ggcgtttctttgtgctctctgcacgcggccaaaggtttggaatgggaagcggtcttcctc
gtcggcctcgtcgaaggggttctgccgctcgggtgggcgagcgccgccggggctgacgcg
gtggccgaggaacgcaggctgctgtacgtcggcatcacgcgggcacggacacgtcttgtg
ctctcgtggtactgcgagcgcgacggccgggccgcccggccgtcgcgcttcctcgcgccg
ctccgctcgaacggagcggaaaaaagcctgatcaaaaattga
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