KEGG   Segniliparus rotundus: Srot_2427
Entry
Srot_2427         CDS       T01238                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
srt  Segniliparus rotundus
Brite
KEGG Orthology (KO) [BR:srt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srt03400]
    Srot_2427
Enzymes [BR:srt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Srot_2427
    5.6.2.6  RNA 3'-5' helicase
     Srot_2427
DNA repair and recombination proteins [BR:srt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Srot_2427
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr DEAD WHD_2nd_Lhr WHD_3rd_Lhr Helicase_C ResIII AbiEi_4 HTH_Crp_2 DUF6406 PhoH
Other DBs
NCBI-ProteinID: ADG98871
UniProt: D6ZBB9
LinkDB
Position
2455824..2460311
AA seq 1495 aa
MAHKPTARSASERFSPPTRAWLHDAFGSATPAQEMAWESISAGANTLVLAPTGSGKTLAG
FLWAVDQLLSEPGKGTRVLYVSPLKSLTADVDRNLRAPLVGIARAAQRLGEPEPKVTVGM
RTGDTTPAQRRELGRLPPDILLTTPESLFLMLTSAAKDTLRSVRTVIVDEIHAMVNTKRG
AHLALSLERLDNALERPAQRIGLSATARPPEEVARFLSGSAPTTVVAPPAHKRVEVSVCV
PVPDMTDLEDNTIWPAIEERIVDLVESHRSTIVFVNSRRLSERLTTRINEVHAERAAGRG
EPEAAERALARTHHGSVSKEQRALIEDDLKNGVLKAVVGTASLELGIDMGSVDLVIQVES
PPSVASGLQRVGRAGHQVGELSRGVVIPKHRTDLLQCAVAAEQMLAGATEPLRTLANPLD
VLAQHTVAAAAMEDLDVEQWFDTVRRSAPFTTLPRSAYEATLDLLSGKYPSTEFAELRPR
LVYDRAEGTLAARPGAQRLAVTSGGAIPDRGMFAVYLAAGDEGGRQSRVGELDEEMVYEC
RPGDFITLGATSWRITDIGPDRVLVLPAFGEPAKLPFWHGEGPGRPAELGEALGRFSAEL
SRSRPEEFERRCAAVGLDQNATENLRALLDEQQRATGKLPTDTTLMVERFRDELGDWRVA
LLSPYGMRMHAPLALAVGARLRELYGVEGQATAFDDGVVVRVPDTGESAPGAELFVFEPD
DIDPVVTEQISGSALFAARFRECAARALLLPRRAPGKRAPLWLQRQRAAQLLDVARKYQD
FPIVLETARECLQDVFDLPQLTRLMARVARHEVRLLTVETTAPSPFAAALMFGYVGAFMY
EGDVPLAERRAAVLSLDMNLLAELLGRIDLREMLDPQVLEKTFQELQRLAPGRRARDAEG
IADLLRVLGPLTEDELRARSEDLDVAAAAAELAAARRTVAMSFAGRRWHVAVEDAGRLRD
GVGAAVPAGVPGAFTEPVADPLREILGRYARTRGPFTTADAADRFGLAPRAAEEALRRLA
AQGALVRGEFVVADEAQQWCDSDVLRILRRRSLAAARAQVEPVTAAAYAQYLPAWQRVAD
PSCSGTDGVLAVVEQLAGAAVPASALEPLVLGQRVRDYRPEMLDELFAAGELLWSGAGTM
HGNDGWVALHLADCAALSLAPPPERELTEAHRAILDALGGEGRGGGGFFFRQLVDGATES
AAREALWDLVWAGKVTNDTFAPVRALLAGSARSRSAPAAHRQRRRGSPVQFRASRGPARA
ADPVVSGRWSSLPQPEPNSTLRAHFWAEQLLARHGVVTKGAVGAEGVPGGFAAVYKILTA
LEDSGLCQRGYFVESLGGAQFTSPAAVDRLRSYQELATAREKPRVAHVLAATDPANPFGA
ALPWPARGAADDSPPSHRPGRRPGAIVVLHEGELVWYLERGGRSLLVFAPEDGPQRAAAE
ALVALVRSGRLAGLVVERVDGASSLGADLPAAAQRAARALLEAGFARTPRGLRLR
NT seq 4488 nt   +upstreamnt  +downstreamnt
atggcccataagccgaccgcgcgctccgcctcggagcgtttctcgccgcccacgcgagcg
tggttgcacgacgcgttcggctcggcgaccccggcccaggaaatggcgtgggagtcgatc
tcggcgggcgcgaacaccttggtgctcgcgccgaccgggtcgggcaaaactttggcggga
ttcctgtgggccgtcgaccaattgctgagcgagcccggcaaagggacccgggtcctgtac
gtctcgccgttgaaatctttgaccgccgacgtcgaccggaacctgcgcgccccgctggtc
ggcatcgcgcgcgccgcgcagcggctgggcgagcccgagcccaaggtcaccgtgggcatg
cggaccggggacaccacgccagcccaacgtcgcgagctgggccgcctgccgccggacatc
ttgttgaccaccccggagtcgttgttcctcatgctcacctcggcggcgaaagacacgctg
cgatccgtgcgcaccgtgatcgtggacgagatccacgcgatggtgaacacgaaacgaggc
gcgcacctcgcgctctccctcgaacggctcgacaacgcgctggaacgtcccgcccaacgg
atcgggctgtccgccaccgcccgcccgcccgaggaagtggcccggttcctgtccggctcg
gctccgacaactgttgtggccccgcccgcgcacaaacgggtcgaggtctcggtctgcgtc
cccgtgccggacatgaccgacctcgaggacaacacgatatggcccgccattgaggagcgg
atcgtcgacctcgtcgagtcccatcgctccaccattgtgttcgtgaattcgcgcaggctc
tccgaacgcctgaccacacgcatcaacgaggtgcacgccgaacgcgcggcagggcgcggc
gaacccgaagccgcggagcgcgcgctggcccgcacgcaccacggttcggtgagcaaggaa
caacgcgccctcatcgaggacgacctgaaaaacggcgtgctgaaagcggtggtcggcacc
gcgagtttggagctcggcatcgacatgggctccgtcgacctcgtcatccaagtcgaatcc
ccgccgtcggtcgccagcgggctgcaacgggtcgggcgggcgggccaccaggtcggagag
ctctcccgcggggtggtcatcccgaaacatcgaacggacctgctgcaatgcgcagtcgcc
gccgagcagatgctcgctggcgcgaccgagccgttgcgcacgctggcgaacccgctcgac
gtgctggcgcaacacactgtcgcggcggccgcgatggaagacctcgacgtcgagcagtgg
ttcgacaccgtgcggcgcagcgccccgttcacaaccctgccgcgcagcgcgtacgaggcg
actttggacttgctctcgggcaaatacccttcgacggagttcgccgagctgcgaccgcga
ttggtgtacgaccgcgccgaaggcaccctcgccgcgcgcccaggggcgcagcgcctggcc
gtcacctccggcggcgccatcccggaccgaggcatgttcgccgtctatctcgcagcgggc
gacgagggcgggcgccagtcccgagtgggcgagctggacgaggagatggtgtacgagtgc
cgtcccggcgacttcatcaccctcggagccaccagctggcggatcaccgacataggccca
gaccgggtgctggtgctgcccgcgttcggcgagccggcgaagttgccgttctggcatggc
gaagggcccggcaggcccgcggaactcggcgaggcgctcggcaggttctccgctgagctg
tcccgttcgcgccccgaggagttcgaacggcgctgcgccgcggtggggctggaccagaac
gccaccgagaacctccgagcccttttggacgagcagcagcgggccaccggcaaactcccc
accgacaccaccctgatggtggagcgcttccgcgacgagctcggcgactggcgggtggcg
ctgctgtccccctacgggatgcggatgcacgccccgttggccttggcggtgggggcgcgg
ctgcgcgagctctacggggtcgaggggcaagcgaccgcgttcgacgacggcgtcgtggtc
cgggtgcccgacaccggggagagcgcgcccggcgcggagctgttcgtgttcgagcccgac
gacatcgaccccgtcgtgaccgagcagatcagcggctcggcgctgttcgccgcgcggttt
cgcgagtgcgcggctcgggcgctgctgctgccgcgccgcgctccgggcaagcgagccccg
ctgtggttgcagcgccaacgcgccgcccaactgctcgacgtggcccgcaaataccaggac
ttccccatcgtgctggagactgcccgagagtgcctgcaagacgtgttcgacctgccgcag
ctgacccgcctcatggcacgcgtcgcgcgccacgaggtgcggctgctcaccgtcgagacc
actgccccgtcgccgttcgccgcggcgctcatgttcggctacgtcggcgcgttcatgtac
gagggggacgtcccgctcgccgaacgacgcgcagcggtgctgtccttggacatgaacctg
ctcgccgagctgctcgggcggatcgacctgcgcgagatgctcgacccccaggtgctcgag
aagaccttccaagaactgcaacggctcgcgccagggcgccgggcccgcgacgcggaaggc
attgccgacctgctgcgggtgctcggcccgctcacggaggacgagctgcgcgcgcgcagc
gaagacctcgacgtcgctgccgccgcggccgagctggccgcggcgcgccgcacggtggcc
atgtcgttcgctggacggcgttggcatgtcgccgtggaggacgcgggcaggctgcgcgac
ggggtgggcgccgctgtcccggcgggcgtccccggcgcgttcaccgagccggtcgccgat
ccgttgcgcgagattttggggcggtacgcgcgcactcgcggcccgttcaccacagcagac
gcggctgatcggttcggcctcgcgccccgtgcggcagaggaggccctgcgtcggctcgcc
gcgcagggcgcgctggtccggggcgaattcgtcgtggctgacgaagcccaacaatggtgc
gacagcgacgtgctgcgaatactgcgcaggcgctcgctcgccgccgcccgcgcgcaagtc
gaacccgtcaccgccgccgcctacgcgcagtacctgcccgcctggcaacgagtggccgat
ccgtcgtgctccggcacggacggtgtgctcgcggtggtcgagcagctcgccggagccgct
gtgccagcttcagccctcgaaccgctcgtgctcggccaacgggtgcgcgactaccggcct
gaaatgctcgacgagctcttcgccgcaggcgagttgttgtggtccggcgctggcacgatg
cacggcaacgacggctgggtcgccctgcacttggccgattgcgcggcgttgtcgttggcc
cctcccccggaaagagagctcaccgaagcccaccgggccatcttggacgccctcggcggg
gagggccgcggcggcgggggcttctttttccgccagctcgtggacggcgcgaccgagtca
gcggcgcgagaagccctgtgggatctggtctgggcgggcaaagtcacgaacgacaccttc
gccccggtgcgcgcgctgcttgcggggtcagcccggagcagaagcgcgcctgcggcgcac
cgccagcgccgcagaggctcgccggtgcagttccgcgcaagccgaggcccggcgcgcgcc
gccgatcctgtcgtgtccggccggtggtcgtcgttgccgcagccggagccgaactcgact
ttgcgggcccatttttgggcagagcagctgctcgcccggcacggcgtggtcacaaaaggc
gcggtcggcgcagagggcgtgcccggcggtttcgccgccgtgtacaaaatattgaccgcg
ctggaagactccgggctctgccagcggggctacttcgtcgagtctctcggcggggcgcag
ttcaccagccccgccgcggtggaccggttgcgttcctaccaagaactcgccacagcgcgg
gagaaaccccgggttgcgcacgtcttggccgcgacagaccccgccaacccgttcggcgcg
gcgctgccctggcccgctcgcggcgcggcggacgactcgccgccgtcgcaccggcccgga
cgcaggcccggagccatagtggtgctccacgaaggcgaactcgtctggtacctggagcga
ggcggacgttccctgctcgtgttcgcgcccgaagacggcccgcagcgcgccgccgccgag
gcgttggtggcgctggtgcgctccggccgcctggccgggctcgtcgtcgagcgggtggac
ggcgcgtcctcattgggagcggatctgcccgccgcggcccagcgagcggcgcgcgcgctg
ctcgaagcaggattcgcccgaaccccgcgcgggctgcggctgcgctga

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