Segniliparus rotundus: Srot_2504
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Entry
Srot_2504 CDS
T01238
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
srt
Segniliparus rotundus
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srt03016
]
Srot_2504
Enzymes [BR:
srt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Srot_2504
Transfer RNA biogenesis [BR:
srt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Srot_2504
Prokaryotic type
Srot_2504
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADG98941
UniProt:
D6ZBI9
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All DBs
Position
complement(2561706..2562542)
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AA seq
278 aa
AA seq
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MSPSSRDTLRLRLDVAYDGTEFSGWARQPGRRTVAGVIEEALSTLLQSSAQLTVAGRTDA
GVHATGQVAHVDVRADLVSGRLPPEKLVRKLARMLPTDVRVLSAQKVSAQFDARFSALRR
HYRYHITRSVYGADPLRAREVVPWARPLDFDVLNAASSALVGLHDFAAFCRPRPGATTIR
ELQRFEWAESGVLITASITADAFCWSMCRSLVGAVTAVAEGRRDLAWIRSLLTASSRASE
ITVAPAHGLCLVGVDYPEESAWGIRNEQTRDIRTSDSS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgagttctcgggacacgcttcggttgcgcctcgacgtggcctatgacgggacg
gagttctcggggtgggcgcgtcagccgggcaggcgcaccgtggccggggtgatcgaagaa
gctttgagcacgcttttgcagagctcggctcagctcacagtcgcgggacggacggacgcc
ggcgtgcacgccacgggccaagtcgcccatgtggatgtgcgcgctgatctcgtttcaggg
cgcctgccaccggaaaagcttgtgcgcaaactcgcccgtatgctcccgaccgacgtgcgc
gtgctgtcggcgcaaaaagtgtcagcgcagttcgacgctcgattctcggcgctgcgcagg
cactaccggtatcacatcacccggtcggtgtacggcgctgacccgctgcgcgcccgtgag
gttgtgccatgggccaggccgctcgacttcgatgtgttgaacgcggcgtcttcggccctc
gtcggactccacgacttcgcggcgttctgccgaccacgccctggggccacaacaatccgc
gagctccagcgattcgaatgggccgagtcaggtgtgctcatcaccgcctcgatcactgct
gacgcgttctgttggtcgatgtgccgttctctcgtgggggcggtgaccgcggtcgcggag
ggcaggcgagacctcgcctggatcaggagcctgctcacggcttcctcccgtgccagcgag
atcacagtcgcaccagcgcatgggctttgtctggtgggcgtcgattaccccgaagagtcg
gcatgggggatcaggaacgagcagacccgcgatattcggacctcggattcttcctaa
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