Segniliparus rotundus: Srot_2506
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Entry
Srot_2506 CDS
T01238
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srt
Segniliparus rotundus
Pathway
srt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Srot_2506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srt03021
]
Srot_2506
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_2506
Enzymes [BR:
srt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Srot_2506
Transcription machinery [BR:
srt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Srot_2506
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Srot_2506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ADG98943
UniProt:
D6ZBJ1
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All DBs
Position
complement(2563113..2564165)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPVLTEEVVGEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTIAGVKEDVTEIVLNVKGLEVSSVEDEPATLYLRKQGPGPVTAADIVAPAGVTITK
PETHIATLNDKGKLEMELVVERGRGYVPAVQNKDSGAEIGRIPVDSIYSPVLKVTYQVEA
TRVEQRTDFDRLILDVETKSSITPRDAVASAGKTLVELFGLARELNLAAEGIEIGSVAAA
TNNIASLGLPIEDLHLTVRSYNCLKREGVHTIGELVARSESDLLDIRNFGQKSIDEVKLK
LYTLGLALKDSPANFDPSNIDFDEDGAWDGDDDQDTEDLDGEDFAETEDL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgccctgtgctcaccgaggaagtggtgggcgagtaccggtcccgg
ttcgtcatcgagccgttagagcccggcttcggctacacgctcggcaactccctgcggcgc
actctgctgtcgtcaattccgggagcggctgtgaccagcatccgcattgacggcgtgctg
cacgagttcaccaccatcgccggtgtgaaagaagacgtgaccgagatcgttctgaacgtg
aaggggcttgaggtctcctccgtcgaggacgagcccgcgacgctctacctgcgcaagcag
ggccccggccccgtgaccgccgctgacatcgtggcgcctgctggtgtgacgatcaccaaa
cccgagacgcacatcgcgacgctcaacgacaagggcaagttggagatggagctcgtcgtc
gaacgtggccgaggctacgttccggccgtgcagaacaaggactccggcgccgagatcggc
cggattcctgtggactcgatctactcccccgtgctcaaggtgacttaccaagtggaggcc
actcgtgtcgagcagcgcacagacttcgaccggctcatcctggacgtggagacaaagagt
tccatcaccccccgcgatgccgtcgcctctgctggcaagacgctggtggagttgttcggc
ctcgctcgggagctgaacctcgctgccgaggggatcgagatcggctcggtcgccgctgcc
acgaataacatcgcctcgctcgggctgccgatcgaggacctgcatctcacggtgcgctcg
tacaactgcttgaagcgtgaaggcgtgcacaccatcggcgaacttgtggcccgctctgag
tccgacctcttggacatccgtaacttcggccagaagtccattgacgaggtcaaactcaag
ctctacaccctcgggctcgctctgaaagacagccccgcgaacttcgacccctccaatatc
gacttcgacgaagacggcgcatgggacggggacgatgaccaagacaccgaagatctggac
ggcgaggacttcgccgagacggaagacctgtaa
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