Segniliparus rotundus: Srot_2586
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Entry
Srot_2586 CDS
T01238
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
srt
Segniliparus rotundus
Pathway
srt00300
Lysine biosynthesis
srt00550
Peptidoglycan biosynthesis
srt01100
Metabolic pathways
srt01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Srot_2586
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Srot_2586
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Srot_2586
Enzymes [BR:
srt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Srot_2586
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
KH_DEAH11_2nd
Motif
Other DBs
NCBI-ProteinID:
ADG99021
UniProt:
D6ZC52
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All DBs
Position
complement(2657109..2658584)
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AA seq
491 aa
AA seq
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MIPWTLRQVAAAVGGKLHQVPDPEQLVTAPLEHDSRKVVPGGLFLAVPGERTDGRSHAAA
AHAAGAVATLSSDPLDVPTVVLGAGPYPTGPQESRRLALAALAALAKANAQALVARGLTV
VGITGSSGKTSTKDLVTQVLATRGATVGPPGSFNNELGHPWTVLRADQDTRFLVLELAAR
TIGHIAELAQIAQPRIGVVLGVGSAHLGVFGSRENIAIAKGELVEALPCADDGGVAVLNA
DDPLVSAMASRTRARVVRYGMAESADVRAADVRLDPLSRASFTLITPQGDAPVTLRVHGE
HQAHNALAAAAVAAECGLSPAQTAEALSAAQAASPRRMQVAERADGVVVVNDSYNANPES
MRAGLRALVGMAHQCGGASWAVLGQMGELGDDSIVLHDQLGRFVVRLSVDRLVVVGDSRS
AKALHTGAVLEGSWSGEAVLVPDWQSAARLVAAELGPRDVVLVKASQSEGLWQVAEALLE
PRPSDAAGSGL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatcccatggaccctgcgccaggtcgctgcggcggtcggcgggaagctgcatcaggtc
cccgacccagaacagctcgtgacagcccctctggagcatgattcccgcaaggtcgtcccc
ggcgggttgttcctcgccgttcccggcgagcgcaccgacggccggtcgcacgccgccgcc
gcgcacgcggcgggagcggtcgcgacgttgtccagcgatccgctcgacgtgccaacggtc
gtcctgggcgcggggccgtacccgaccggcccgcaggagtcccgccgtctcgcgctggcc
gctctcgccgcattggcgaaggccaacgcccaggcgctcgtggcgcgcgggctcacggtc
gtcgggatcaccggttcgagcgggaagacctccaccaaagaccttgtcacgcaggtcctt
gcgacgcggggcgccacagtcgggcctccgggcagcttcaacaatgagctcggccacccg
tggacggtcctgcgcgcggaccaagacacgcggttcctcgtgttagagctcgctgcccgc
actattgggcatatcgccgaactcgcgcagatcgcccaacccagaatcggcgtcgtgctt
ggcgtcggctccgcgcacctcggcgtgttcggctctcgggagaacatcgccatcgccaag
ggcgagcttgtcgaggctttgccctgcgccgatgacggcggggtggctgtgctcaacgcg
gacgacccgctggtgtcggccatggcttctcggacccgcgcgcgggtggtgcgctacggc
atggcggagagcgccgacgtccgcgcggccgatgtccggctcgaccctctttctcgcgcg
agcttcaccctcatcacgccgcagggcgacgctccggtgacgttgcgggtgcatggcgag
catcaggcgcacaacgccttggcggccgcggcggtggccgcggagtgcgggttgtcgcct
gctcagacagcagaggcgctttcggcggcgcaggcggcttcgccgcgccggatgcaagtt
gccgagcgcgccgacggcgtggtggtcgtgaacgactcgtacaacgccaacccggagtcg
atgcgcgcgggccttcgggcgttggtcggcatggcgcatcagtgcggcggggccagctgg
gctgtgctcgggcagatgggcgagctcggcgacgactccattgtcttgcacgatcagctc
ggcaggttcgtggtccgtctttcggtcgaccggctcgtcgtggtcggcgactcccgttcg
gcgaaagccctgcacaccggcgcggtgctcgaaggctcgtggagcggggaggccgtgttg
gtcccggattggcagtcggcggcgcgtctggtcgccgccgagctgggcccgcgcgacgtg
gtgctggtgaaggcctcacagtccgaagggctttggcaggtcgcggaggcgctcctcgag
ccgaggccctctgatgcggcggggtccgggctgtga
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