Segniliparus rotundus: Srot_2601
Help
Entry
Srot_2601 CDS
T01238
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srt
Segniliparus rotundus
Brite
KEGG Orthology (KO) [BR:
srt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srt03032
]
Srot_2601
03400 DNA repair and recombination proteins [BR:
srt03400
]
Srot_2601
Enzymes [BR:
srt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Srot_2601
DNA replication proteins [BR:
srt03032
]
Prokaryotic type
DNA Topoisomerases
Srot_2601
DNA repair and recombination proteins [BR:
srt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Srot_2601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PDCD7
Motif
Other DBs
NCBI-ProteinID:
ADG99036
UniProt:
D6ZC67
LinkDB
All DBs
Position
complement(2674748..2677579)
Genome browser
AA seq
943 aa
AA seq
DB search
MATVAARRSADGARGSQSDRLRRLVIVESPTKARKLASFLGGEYVVESSRGHIRDLPRGT
ADIPAKYKSEPWARLGVNVEADFDPLYVVSPEKKATVTELKDKLKDVDELYLATDGDREG
EAIAWHLLQTLKPKVPVRRMVFHEITEPAILAAAANPRDLDTDLVDAQETRRILDRLYGY
EVSPVLWKKVMPRLSAGRVQSVATRIIVQRERERMAFRSASYWDLSVTVGTEPEFSAKLV
ELDGLRVASGRDFTPQGEPANPDRVHIVGEAEARALAEALVGAQLDVADVAEKPYSRKPY
PPFMTSTLQQEASRKLRFSTDRTMRIAQRLYENGHITYMRTDSVTLSQQATEAARSQAAA
LFGSDSVPKAPRQYASKAKNAQEAHEAIRPAGDSFVRPEQLAQALDQDELRLYELIWRRT
VASQMVDARGTSTSLRLATTTTAGTASARDCVFAASGLVITNPGFLRAYVETVDELAGGE
ADDAQRHLPQLAKGQQVAAREAAPAEHATSPPARYTEASLVKALEDLGIGRPSTYSSIID
TIQERGYVYKKGAALVPAWVAFAVVGLLEAYFDPLVDYEFTAHMEDELDAIAAGREHRTP
WLNRFYYGDENGPVRSVARAGGLKRLVGANAETIDAREVNSIPVFEDSEARQVWVRVGKF
GPYLERMVKDDQGELVSQRANLQQGLTPDELTPELAEQLFATPSEGRVLGFDPQSGHEIV
VKEGRFGPYVTEVLPPAVVAQQEEKAKAKGGKNAAAPKPRTASLFKSMTPESVTLEDAVR
LLSLPRTVGSDPNTGEEITAQNGKFGPYLKRGSDSRSLANEEQLFTVTLDEALALYAEPK
RRGAQAAAGPLRELGVDPVSGVPMVVKSGRFGPYVTDGTTNASLRKGDEVESLTDERAAE
LLAERRAAGPAKKKPAARRTPAKSTTAKRPTTARKTTTKKPTS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggtggcagcacggcgcagcgccgacggcgcgcgtggttctcagagcgacagg
ctccggcgattggtgatcgtcgagtccccgaccaaggctcgcaagctcgcgtccttcctg
ggcggggagtacgtcgtggagtcctcacgggggcatatccgcgacctgccgaggggcact
gcggacatcccggccaaatacaagtcggagccgtgggccaggctcggggtcaatgtggag
gcggatttcgacccgttgtatgtggtgagcccggagaagaaggccacggtcaccgagctg
aaagacaagctcaaggatgtcgacgagctgtatctcgcgacggacggcgaccgggagggc
gaggcgatcgcctggcacctgctgcagacgctcaaacccaaggtgccggtgcgccggatg
gtgttccacgagatcaccgagccggctatcctcgccgccgcggcgaacccccgcgatctg
gacacggacctcgtggacgcccaggagacccggcgcatcctcgaccgtctctacggctat
gaagtgagcccggtgctgtggaagaaggtgatgccgaggctttccgccggccgggtgcag
tcggtggccacgcgcatcatcgtgcagcgcgagcgtgagcggatggcgttccgttcggcc
tcctactgggatctgtcggtgaccgtggggacggagccggagttctccgcgaagctggtc
gagctcgacggtttgcgggtggcttcgggccgggacttcaccccgcaaggcgagcctgcg
aacccggaccgggtgcatattgtcggggaggctgaggcccgggcgctcgccgaggcgctt
gtcggcgcacagctggacgtcgccgacgtggcggagaagccgtactcgcgcaagccgtat
ccgccgttcatgacctccactctccagcaggaggcgagccgcaagctgcgtttctccacc
gaccggaccatgcggatcgcccagcggctgtacgagaacggccacatcacctacatgcga
accgactcggtcacgctctcccagcaagcgacggaggccgcgcgttcgcaggccgccgcg
ctgttcggatcggactcggtgcccaaggctccccgccagtacgcgagcaaagcgaagaac
gcgcaggaggcccatgaggcgatccgcccggcgggggactccttcgtccgcccggagcag
ctcgcccaggcgctcgaccaggacgagctgcggctgtacgagctgatctggcggcgcacc
gtggcctcgcagatggtggacgctcgcggcacgagcacgagccttcggctcgccaccacg
acgaccgcggggaccgcctcggcgcgtgattgcgtgttcgcggcttcgggactggtcatc
acaaatccgggctttctgcgcgcgtacgtggagacagtggacgagctcgcgggcggcgag
gccgacgacgcccagcgccacctgccgcagctggcgaaggggcagcaggtcgccgcgcgg
gaggcggcgcccgccgagcacgccacctcgccgcccgcccggtacaccgaggcttcgttg
gtgaaggcgctcgaagacctcggcatcggccgtccgtcgacgtactcgtcgatcatcgac
accatccaagagcgcggttacgtgtacaagaagggcgccgcgttggtgcctgcatgggtg
gcgttcgcggtcgtcggccttctggaggcgtatttcgacccgctcgtggactacgagttc
accgcccacatggaggacgagctcgacgccatcgcggctggccgcgagcaccgcaccccg
tggctcaaccggttctactacggcgacgagaacggacctgtgcgatcagtcgcccgcgcg
ggcggtctcaaacgcctcgtcggggcgaacgcggagaccattgacgctcgggaggtcaac
tcgatcccggtgttcgaggactccgaggcgcgtcaggtctgggtccgggtgggcaaattc
ggcccgtacctggagcggatggtcaaggacgaccagggcgagctggtctcgcagcgggcg
aacttgcagcagggcctcacgccggacgagctcacccctgagctggcagagcagctgttc
gccaccccgagcgaaggcagggtgctgggcttcgacccgcaatccggccacgagatcgtt
gtgaaagagggcaggttcggcccgtatgtgaccgaggtgctgccacctgcggtggttgcc
cagcaagaggagaaggccaaggccaagggggggaagaacgccgctgccccgaagccgcgc
actgcgtcgctcttcaagtccatgacccctgagagcgtgaccctcgaggacgctgtgcgg
ctgttgtccttgccccgcacggtcggctccgacccgaacaccggcgaggagatcaccgcg
cagaacgggaagttcgggccgtacctcaaacgcggctctgactcacggtctttggccaac
gaggagcagctgttcacggtcacgctggacgaggctttggcgctgtacgcggagccgaag
cgccgcggagcccaagcggcggccgggccgctccgggagctcggtgtcgatccggtcagc
ggtgtgccgatggtggtcaagagcggccgattcggcccgtacgtcacggacgggacgacg
aacgcgagcctgcgcaagggcgacgaagtggaatcattgaccgacgagcgcgcggcggag
ctgcttgccgagcgtcgtgctgctggtccggcgaagaagaagcccgccgcccgccggact
ccggcgaagagcacgacggccaaacggccgacgacggcccgcaagaccacgacgaagaaa
ccgacgagctga
DBGET
integrated database retrieval system
