Salinibacter ruber DSM 13855: SRU_0056
Help
Entry
SRU_0056 CDS
T00312
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sru
Salinibacter ruber DSM 13855
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sru03016
]
SRU_0056 (trmE)
Transfer RNA biogenesis [BR:
sru03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SRU_0056 (trmE)
Prokaryotic type
Methyltransferases
SRU_0056 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
Ras
ABC_tran
RsgA_GTPase
Arf
ABC_ATPase
AIG1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABC44889
UniProt:
Q2S6H2
LinkDB
All DBs
Position
52573..53958
Genome browser
AA seq
461 aa
AA seq
DB search
MSQSDTIAAIATARGRAALAVVRTSGPAAIEIVDRCFRGDALTDADSHTAHVGVLTDEAG
TDIDQVVATVFRAPNSATGEHVVEVSCHGGDLAPKMALQSLLDHGARMAEPGEFTERAFL
NGKMDLAQAEAVADLIDATSTKAHQASLTHLKGRYSDLLGDLREELLNLCSLVELEIDFS
DEDVEFADRERLEDLLDETEEILGDLLDTYPTGEKLKDGVQVVIGGRPNAGKSTLLNALV
GHDRAIVSETPGTTRDEIEAEAEIEGVLFRFVDTAGLRDTADEIEAEGVRRATESIEEAD
VLFYLYDLTVGLDSQEIAFLQDLADDGSDVQPVVIGNKADRAPDLPVATLDGLTSLKLSA
LEAREDADEVQPLLDHLTDTVAEHLSRAEASPVVMNQRHRQHLRDALDAVQQAREALDAG
VSGDMLTLDLRAALQELGAITGEITNEDVLDQIFSRFCIGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagagtgatacgattgcggccatcgcgacggcgcggggacgggcggcgctggcc
gtcgtgcgcacctccgggccggccgccatcgagatcgtcgaccggtgcttccggggcgac
gcccttacggacgccgacagccacaccgcccacgtcggggtgttgacggacgaggcgggg
accgacatcgaccaggtggtggccaccgtcttccgcgcccccaactcggccaccggcgag
cacgtcgtcgaggtgtcgtgccacggcggcgacctggcgccgaagatggcgctccagagc
ctgctcgaccacggggcccgcatggccgagcccggcgagttcacggagcgcgcgtttctc
aacggcaagatggacctggcgcaggccgaggcggtggccgacctcatcgacgccacctct
acgaaggcccaccaggcgtcgctcacccacctcaagggccgctactccgacctgctcggc
gacctccgcgaggagctgctcaacctctgctcgctcgtggaactggaaatcgacttctcg
gacgaggacgtcgagtttgccgaccgggagcgcctggaggatctgctagacgagacggaa
gagatcctcggagacctgctcgacacctacccgacgggggagaagctgaaggacggcgtg
caggtcgtcatcggcgggcgccccaacgcgggcaagtccaccctgctgaatgcgctcgtg
ggccacgaccgcgccatcgtcagcgagacgcccggcaccacgcgcgacgagatcgaggcg
gaggcggagatcgaaggcgtgctcttccgcttcgtcgacaccgccggcctgcgcgacacc
gccgacgagatcgaggcggagggcgtgcgccgcgccaccgagtccatcgaggaggccgat
gtgctcttctacctctacgacctcacggtcggcctcgactcccaggagatcgcgtttctc
caggacctcgccgacgacgggtcggacgtgcagcccgtcgtcatcggcaacaaggccgac
cgggcgcccgacctgcccgtggccaccctcgacggcctcacgtcgctgaagctctccgcc
ctggaggcgcgcgaggacgccgacgaggtgcagccgctcctcgaccacctcacggacacg
gtcgccgagcacctgagccgcgcagaggcgtcgccggtcgtcatgaaccagcgccaccgc
cagcacctccgggacgccctcgacgccgtgcagcaggcccgagaggcgctcgacgcgggc
gtctccggcgacatgctgacgctcgacctgcgcgcggccctccaggagctgggcgccatc
accggcgagatcacgaacgaagacgtgctcgaccagatcttctcccgcttctgcatcggc
aagtga
DBGET
integrated database retrieval system
