Salinibacter ruber DSM 13855: SRU_0489
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Entry
SRU_0489 CDS
T00312
Name
(GenBank) ribonuclease, Rne/Rng family subfamily
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
sru
Salinibacter ruber DSM 13855
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sru03019
]
SRU_0489
03009 Ribosome biogenesis [BR:
sru03009
]
SRU_0489
Messenger RNA biogenesis [BR:
sru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SRU_0489
Ribosome biogenesis [BR:
sru03009
]
Prokaryotic type
rRNA processing factors
SRU_0489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
FlxA
CCDC113_CCDC96_CC
Fez1
APG6_N
PspA_IM30
Allexi_40kDa
DUF7491
CENPH
Spc29
Tropomyosin
DUF724
DUF641
DUF16
DUF848
V_ATPase_I
EzrA
Phage_GPO
Use1
AAA_23
DUF6594
MTR4-like_stalk
UPF0242
End3
Motif
Other DBs
NCBI-ProteinID:
ABC44436
UniProt:
Q2S597
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Position
664474..666264
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AA seq
596 aa
AA seq
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MSKEIVFNVGNEQTRIAIVEDGKLVELYIENAEHKRTIGNLYLGQIRKVMPSIQAAFVDI
GQEQDAFLHFSDLSDNLPYLLDFLGLEAPTVEAIDVPKGKKDWDKRPSDLLNRGQTILVQ
VTKEPISNKGSRISTDISLAGRFLVLVPLQNYVAVSRKITDDEERRRLESLASSLVPDGV
GVIVRTVAQDRDAKSLDKDMKLLMERWRRVEKRLKDKPSPPELVHEDVDMASSIVRDEFS
EEYDRILVDHEGLYSSIQSYVRAVGPQLVDRVELHEGDQPVFESVGIQHGADRAFKDRVE
LPSGGYLFIEKTEAMHVVDVNSGRSGKGKSQAENSLNVNLEAARVIARQIRLRDLGGIIV
VDFIDLRDEDDKKKVYDEVKKGFEEDRAVTKVLPMSDFGLVEITRQRLRPSITTTFSSAN
GTPSDDGDDGADPEELRQAERKIQSLEKEVEKREREVKRLKAEDDTPDEEVTALRQKIQA
LEDKLEAARAQQTAENATPRPSSSDGSAASAEGDAAPDELVEDIEQWLVAHSDTHRAVTL
RVHPFVAAFLRRPVPTYTTRWFMEHLVRVHVEADTEVPPHTFQVTDESGAPLPESP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaaattgtcttcaacgtcggcaacgagcagacgcgcatcgccatcgtcgaa
gatggcaagctcgtcgagctctacattgaaaacgccgagcacaagcgcacgattggcaac
ctgtacctggggcagatccgaaaggtgatgcccagcatccaggcggccttcgtcgacatc
gggcaggagcaggacgcctttctccacttctcggacctgtccgacaacctgccgtacctg
ctcgacttcctggggctcgaggcgccgacggtggaggcgatcgatgtgccgaagggaaag
aaagactgggacaagcgcccgtccgacctgctgaaccgcgggcagacgatcctcgtccag
gtcaccaaggagcccatctcgaacaagggcagccgcatctccacggacatctcgctcgcg
gggcgcttcctggtgctggtgcccctgcagaactacgttgccgtctcccgcaagattacc
gacgacgaggagcgccgccgcctcgagtccctggccagcagcctcgtccccgacggcgtg
ggggtcatcgtgcgcaccgtggcccaggaccgcgacgccaagtcgctggacaaggacatg
aagctgctgatggagcggtggcgccgcgtggagaagcgcctcaaggacaagccgagtccc
ccggagctcgtgcacgaggatgtggacatggcgtcctccatcgtgcgggatgagttttcg
gaggagtacgaccgcatcctggtcgaccacgaggggctgtacagcagcattcagagctac
gtgcgggccgtggggccgcagctggtcgaccgcgtggagctgcacgagggcgaccagccg
gtcttcgagtcggtggggatccagcacggggccgaccgcgcgttcaaggaccgcgtggag
ctgccgtccggcggctacctcttcatcgagaagaccgaggcgatgcacgtggtcgacgta
aactcgggacgctccgggaagggcaaatcgcaggccgaaaactcgctcaacgtcaacctg
gaggccgcccgcgtgattgcccggcagattcgactccgcgacctggggggcatcatcgtc
gtcgacttcatcgacctgcgggatgaggacgacaagaaaaaggtctacgacgaggtcaag
aagggcttcgaggaagaccgcgcggtgacgaaggtgctgccgatgagcgactttgggctc
gtcgagatcacccgccagcggctccgccccagcatcacgacgaccttttcgtcggccaac
gggaccccgtccgacgacggcgacgacggggccgaccccgaagagctccgccaggccgag
cgcaaaattcagagcctggagaaggaggtggagaagcgcgagcgcgaggtgaagcgcctg
aaggcggaggacgacaccccggacgaagaggtgacggccctgcggcagaaaattcaggcg
ctcgaagacaagctcgaagcggcccgggcccagcagacggcggagaacgcgacgccacgt
ccgtcttcgtcggatggatccgccgcctccgcagagggggacgccgcccccgacgaactt
gtggaggacatcgagcagtggctcgtggcgcacagcgacacccaccgcgccgtgacgctc
cgggtgcatccgttcgtcgcggcgttcctgcggcgccccgtgcccacgtacacgacccgc
tggttcatggagcacctggtgcgcgtccacgtcgaggcggacaccgaggtgccgccgcac
acctttcaggtgacggacgagtccggcgctcccctgccggagtcgccgtag
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