Salinibacter ruber DSM 13855: SRU_0498
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Entry
SRU_0498 CDS
T00312
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03030
DNA replication
sru03430
Mismatch repair
sru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRU_0498 (holA)
03430 Mismatch repair
SRU_0498 (holA)
03440 Homologous recombination
SRU_0498 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sru03032
]
SRU_0498 (holA)
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_0498 (holA)
Enzymes [BR:
sru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRU_0498 (holA)
DNA replication proteins [BR:
sru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRU_0498 (holA)
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRU_0498 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ABC44929
UniProt:
Q2S588
LinkDB
All DBs
Position
672803..673846
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AA seq
347 aa
AA seq
DB search
MAKDTGPSYDDLATAFRHQNFEPLYFFFGEETFLIDELQELLIDEALDPSQHDFNLDVVY
GSETEASEVIGLCQGFPAGAPKRVVVVREFEKLENNRQFKDYAAQPNPQAIVLLACTSKP
NLSAHPYRALKEHATWSEFESPYDNEMPGWIQDYVQGQGYEIKPKAVQMLADYVGTDLQR
AASEIEKLITFAGDATRLTADDVLAASGQTREFNVFELQSALGEGRPADAQRIVDRILQQ
ASNPRSEAIMMVAVLNGYFDKLWKLQKPGALRENKYDLAGYIGVSPYFVEEYKHAAQRYD
RSAIADAYSALVAADYELKGGASREASLVMTLLLRRLLPPDARPVAA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacacgggcccgtcctacgacgatctggccacggccttccggcaccaaaac
ttcgagcccctctactttttctttggagaggagaccttcctgatcgacgagctgcaggag
ctgctcatcgacgaggcgctcgacccgagccagcacgacttcaacctcgacgtggtgtac
gggtcggagacggaggcttcagaggtgattgggctgtgccagggctttccggcgggggcg
ccgaagcgggtcgtggtggtccgcgagttcgagaagctcgagaacaaccgtcagttcaag
gactacgccgcccagcccaatccgcaggccatcgtcctgctcgcctgcaccagcaagccg
aacctgagcgcccatccgtaccgcgcgctgaaggagcacgccacgtggtccgagttcgag
tcgccgtacgacaacgagatgccgggctggattcaggactacgtgcagggccaggggtac
gagatcaagccgaaggccgtccagatgctcgccgattacgtgggcaccgacctgcagcgg
gcggcgagcgagatcgagaagctcatcacgtttgccggcgacgccacgcggctcacggcc
gacgacgtgcttgccgccagcggccagacgcgcgagttcaacgtctttgagctgcagagc
gccctgggggaggggcgtcccgccgacgcacagcgtatcgtcgaccgcattctgcagcag
gcgtccaacccgcgcagcgaggccatcatgatggtggccgtgctcaacggctatttcgac
aagctctggaagttgcagaagcccggggccctgcgcgagaacaagtacgaccttgccggc
tacatcggggtcagcccctacttcgtagaggagtacaagcacgccgcccagcgctacgac
cgctcggcgattgccgacgcctactcggccctcgtggcggcggactacgagctcaagggc
ggggcgtcccgcgaggcctcgctcgtgatgacgctcctgttgcggcggctgcttccgccg
gatgcccgtccggtggcggcgtag
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