Salinibacter ruber DSM 13855: SRU_0588
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Entry
SRU_0588 CDS
T00312
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru00521
Streptomycin biosynthesis
sru00523
Polyketide sugar unit biosynthesis
sru00525
Acarbose and validamycin biosynthesis
sru00541
Biosynthesis of various nucleotide sugars
sru01100
Metabolic pathways
sru01110
Biosynthesis of secondary metabolites
sru01250
Biosynthesis of nucleotide sugars
Module
sru_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SRU_0588 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SRU_0588 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SRU_0588 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SRU_0588 (rfbB)
00525 Acarbose and validamycin biosynthesis
SRU_0588 (rfbB)
Enzymes [BR:
sru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SRU_0588 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
ABC43680
UniProt:
Q2S500
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All DBs
Position
771918..772946
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AA seq
342 aa
AA seq
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MNDTLLVTGGAGFIGSAVVRHLIQETEATVVTVDALTYAGHRENLAPVMESPRHHFEQED
ITDAPVMHRLFEEHEPDGAIHLAAESHVDRSIGGPAAFVQTNVVGTQVLLEAARTYWEDQ
GRPGGFRFLHVSTDEVYGELGETGAFTEETPYDPSSPYSASKAGADHLARAWHRTYDLPV
LITNCSNNYGPHQHPEKLIPVVILNALEGEPIPVYGDGKNVRDWLYVKDHVRALLRVLTE
GRVGETYNIGGGQERENIAVVRQICDILDETRPPGSTLETKSHHDLITFVEDRPGHDWRY
AIDASKIEGELGWAPEVSFEEGLRRTVDWYVEHRDWVRAVQG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacacccttcttgtcaccggtggggccggttttatcggctcggcggtggtgcgc
cacctcatccaagagaccgaggcgacggttgtcacagtcgacgccctcacctacgccggg
catcgcgaaaacctcgcgccggtgatggaaagtccccgtcaccatttcgagcaggaggac
atcaccgacgccccggtgatgcatcggctgttcgaggagcatgagccagatggggcaatc
cacctcgcggcggagtcgcacgtggaccgctccatcggcggccccgccgccttcgtgcag
acgaatgtggtcggcacgcaggtgctgctggaggcggcgcggacctactgggaagaccag
ggccggccgggcggctttcgcttcctccacgtctcgaccgacgaggtgtacggggagctc
ggggagaccggcgcgttcacggaggagacgccctacgacccgagttccccgtattcggcc
agcaaggccggggccgaccacctcgcccgggcgtggcaccgcacctacgacctgccggtg
ctcatcacgaactgctcgaacaactacggcccgcatcagcacccggagaagctgattccg
gtcgtgatcctgaatgccttagagggtgagcccattccggtgtacggcgacgggaaaaat
gtgcgcgattggctttacgtgaaggaccatgtgcgggccctgctgcgcgtgctgactgag
gggagagtgggcgaaacctacaacatcgggggggggcaggagcgagagaacattgcggtc
gtccgccagatttgtgatatcctcgatgagacgcggccgccgggcagcacccttgagacg
aagagccaccacgacctgattacatttgtggaggatcggccggggcacgactggcgctac
gccatcgacgcgagcaaaatcgaaggcgagctcgggtgggcgcctgaggtctcgtttgag
gagggcctgcgccggacggtcgactggtacgtagagcaccgcgactgggtgcgggcggtg
cagggctga
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