KEGG   Salinibacter ruber DSM 13855: SRU_0588
Entry
SRU_0588          CDS       T00312                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sru  Salinibacter ruber DSM 13855
Pathway
sru00521  Streptomycin biosynthesis
sru00523  Polyketide sugar unit biosynthesis
sru00525  Acarbose and validamycin biosynthesis
sru00541  Biosynthesis of various nucleotide sugars
sru01100  Metabolic pathways
sru01110  Biosynthesis of secondary metabolites
sru01250  Biosynthesis of nucleotide sugars
Module
sru_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sru00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    SRU_0588 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SRU_0588 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    SRU_0588 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SRU_0588 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    SRU_0588 (rfbB)
Enzymes [BR:sru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SRU_0588 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind 3Beta_HSD Polysacc_synt_2 NAD_binding_4 adh_short KR NmrA
Other DBs
NCBI-ProteinID: ABC43680
UniProt: Q2S500
LinkDB
Position
771918..772946
AA seq 342 aa
MNDTLLVTGGAGFIGSAVVRHLIQETEATVVTVDALTYAGHRENLAPVMESPRHHFEQED
ITDAPVMHRLFEEHEPDGAIHLAAESHVDRSIGGPAAFVQTNVVGTQVLLEAARTYWEDQ
GRPGGFRFLHVSTDEVYGELGETGAFTEETPYDPSSPYSASKAGADHLARAWHRTYDLPV
LITNCSNNYGPHQHPEKLIPVVILNALEGEPIPVYGDGKNVRDWLYVKDHVRALLRVLTE
GRVGETYNIGGGQERENIAVVRQICDILDETRPPGSTLETKSHHDLITFVEDRPGHDWRY
AIDASKIEGELGWAPEVSFEEGLRRTVDWYVEHRDWVRAVQG
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgaacgacacccttcttgtcaccggtggggccggttttatcggctcggcggtggtgcgc
cacctcatccaagagaccgaggcgacggttgtcacagtcgacgccctcacctacgccggg
catcgcgaaaacctcgcgccggtgatggaaagtccccgtcaccatttcgagcaggaggac
atcaccgacgccccggtgatgcatcggctgttcgaggagcatgagccagatggggcaatc
cacctcgcggcggagtcgcacgtggaccgctccatcggcggccccgccgccttcgtgcag
acgaatgtggtcggcacgcaggtgctgctggaggcggcgcggacctactgggaagaccag
ggccggccgggcggctttcgcttcctccacgtctcgaccgacgaggtgtacggggagctc
ggggagaccggcgcgttcacggaggagacgccctacgacccgagttccccgtattcggcc
agcaaggccggggccgaccacctcgcccgggcgtggcaccgcacctacgacctgccggtg
ctcatcacgaactgctcgaacaactacggcccgcatcagcacccggagaagctgattccg
gtcgtgatcctgaatgccttagagggtgagcccattccggtgtacggcgacgggaaaaat
gtgcgcgattggctttacgtgaaggaccatgtgcgggccctgctgcgcgtgctgactgag
gggagagtgggcgaaacctacaacatcgggggggggcaggagcgagagaacattgcggtc
gtccgccagatttgtgatatcctcgatgagacgcggccgccgggcagcacccttgagacg
aagagccaccacgacctgattacatttgtggaggatcggccggggcacgactggcgctac
gccatcgacgcgagcaaaatcgaaggcgagctcgggtgggcgcctgaggtctcgtttgag
gagggcctgcgccggacggtcgactggtacgtagagcaccgcgactgggtgcgggcggtg
cagggctga

DBGET integrated database retrieval system