Salinibacter ruber DSM 13855: SRU_1060
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Entry
SRU_1060 CDS
T00312
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SRU_1060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sru03021
]
SRU_1060 (rpoA)
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_1060 (rpoA)
Enzymes [BR:
sru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SRU_1060 (rpoA)
Transcription machinery [BR:
sru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SRU_1060 (rpoA)
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SRU_1060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABC44696
UniProt:
Q2S3N9
LinkDB
All DBs
Position
1334278..1335243
Genome browser
AA seq
321 aa
AA seq
DB search
MPEGVHVEEVSDSEGQFVMGPLERGYGVTIGNALRRVLLSSLRGLAITAVKIDGVQHEFS
TIPGVTEDVADLILNLKEVRFKADEMQEGHLHLNLEGPGNWTAADIDEATAEYDVLNPDQ
HVATLAEDAVVNVDLRVGYGRGYVPSEENKREDDPIGVIAIDSIFTPIKNVNYEVKPTRV
GQKIDYEELLLDVETDGSLTPEEAITQGASILRDHVSFFIQLEEEPEPVVEEQEVDEEVK
RIRELLAQPVDELDLSVRSHNCLKAANIKTIGDLVRREEDEMLKFRNFGRKSLQELVEVL
DERGLQFGMDVEEYLEEKKAS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggcgtccacgttgaggaggtctccgattccgaaggtcaattcgtcatgggg
ccgctcgaacgcggctacggcgtgaccatcggaaacgccctccgtcgcgtgttgctgtcg
tccctgcgcggcctcgccatcacggccgtcaagatcgacggcgtccagcacgagttttcg
accattccgggcgtcaccgaagacgtggccgacctgatcttgaacctgaaagaagtgcgg
ttcaaggcggatgagatgcaggagggacatctccacctgaacctcgaagggcccggcaat
tggacggccgccgacatcgacgaggccaccgcggagtatgatgttttgaatcccgatcag
cacgtcgcaaccctcgccgaagacgccgtcgtcaacgtggatctccgggtcggatacggc
cgtggatacgttccgtccgaggagaacaagcgggaggacgacccgatcggcgtcattgcg
atcgactcgatctttaccccgatcaagaacgtcaactacgaggtcaagccgacccgtgtg
gggcagaagatcgactacgaggagctgctcctggacgtggagaccgacgggtcccttacg
ccggaggaggcgatcacacagggggcctcgatcctccgggaccacgttagcttcttcatt
cagctggaggaggagcccgagccggtcgtggaggagcaggaggtcgacgaggaggtcaag
cgcatccgcgagctgctcgcgcagccggtcgacgagctcgacctgtcggtgcgctcgcac
aactgcctcaaggcagccaacatcaagaccatcggggaccttgtgcgtcgcgaggaggac
gagatgctcaagttccgcaacttcgggcgcaagtcccttcaggagctcgtggaggtcctc
gatgagcgcgggcttcagtttggcatggacgtggaggagtacctcgaagagaagaaagcg
tcctag
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