Salinibacter ruber DSM 13855: SRU_1441
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Entry
SRU_1441 CDS
T00312
Name
(GenBank) exonuclease family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03030
DNA replication
sru03430
Mismatch repair
sru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRU_1441
03430 Mismatch repair
SRU_1441
03440 Homologous recombination
SRU_1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sru03032
]
SRU_1441
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_1441
Enzymes [BR:
sru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRU_1441
DNA replication proteins [BR:
sru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SRU_1441
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SRU_1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
UVR
GIY-YIG
DUF7508
DUF6606
DUF7511
Motif
Other DBs
NCBI-ProteinID:
ABC45996
UniProt:
Q2S2L6
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All DBs
Position
1792197..1793813
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AA seq
538 aa
AA seq
DB search
MEIGAVKVRDGSVVDRFQQLVNPQQSVPGRITKMTGITTGMVFEAPPADEVLPDYRAFLG
DGILVAHNVSFDGSFLDAELQRMGDETLPNETLCTVRLARRLLPGLDSKGLSRLAQFYDI
DVEGRHRALGDAEATSVVLRRFVSQLAFEHEVETVEALLRFQHQSYQTVREVPGHIESIR
DEVLPDVPDEPGVYVMKNRSGTPLYIGKAKRLPDRLRSHFTAVESSGARKRKMLQKVRSV
DWTTTATELEAILLESRRIKAEKPRYNRAQRRYYNRPFIRLDTAHEYPTVSWTRRLEADG
AEYYGPVRNTEQAEMVVDVVGRFFQLRECDDERLHLGQRCLYADMDRCTVPCETKDAEAY
ATVVERVRAFLTGQDQSVLGTMRDRMQRASDNLNFEKAAELRDTLEQLERILEKQRVAAA
PVRQHNAALVHQAPDRAGRVDVMLVRFGRFEESIACAAPPSPEERDSLLERCRSVFDVEA
DPPETFSKRDATEIRLLSHWVYAHRDELTAVRWTPRTSPADLADAIAGRVQGQPQQSA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagatcggggcggtgaaggtacgggacgggtcggtggtcgaccgcttccagcagctc
gtcaatccccagcagtccgtcccggggcgcatcaccaagatgaccgggatcacgacgggc
atggtcttcgaggcgccgccggccgacgaggtcctgccggactaccgcgccttcctgggg
gatggcattctcgtggcgcacaacgtgtcgttcgacgggtccttcctggacgctgagttg
caacggatgggagacgagacgcttcccaacgagacgctctgcacggtccggttggcacgg
cggctgctgccggggctcgactcgaagggcctcagtcggctcgcgcagttctacgacatc
gacgtggagggacgacaccgggcgctcggggacgcggaggcgacgagcgtggtgctgcgc
cggttcgtcagccagctggccttcgagcacgaggtcgagaccgtcgaggccctgctgcgc
tttcagcaccagagctaccagacggtgcgggaggtgccggggcacatcgagtccatccgg
gacgaggtcctgccggacgtgccggacgagccgggggtctacgtgatgaagaaccgttcg
ggcacccccctgtacatcggcaaggccaagcgcctgcccgaccgcctccgcagccacttc
acggcggtcgagtcgagcggcgcccgcaagcggaagatgctccagaaggtgcggtcggtg
gactggacgacgaccgcgactgagctggaggccatccttctggagtcgcggcgcatcaag
gcggagaagccccggtacaaccgggcgcagcgccgctactacaaccggcccttcatccgg
ctggacacggcccacgagtacccgacggtgtcgtggacccgtcggctggaggcggacggg
gccgagtactacggcccggtgcgcaacaccgagcaggcggagatggtggtggacgtggtc
ggccggttctttcagctccgcgagtgcgacgatgagcgcctgcacctgggccagcggtgc
ctctacgccgacatggaccggtgtaccgtgccgtgcgagacgaaggacgcggaggcgtac
gccacggtcgtggagcgcgtgcgggccttcctcaccggacaggaccagagcgtgctcggc
acgatgcgggaccgcatgcaacgggcctccgataacctcaatttcgagaaggccgccgag
ctgcgggacacgctggagcaactggagcgcattctggaaaagcagcgcgtggcggcggcg
ccggtgcggcagcacaacgccgccctcgtccaccaggcccccgaccgggcgggccgcgtg
gacgtgatgctggtgcggttcgggcggttcgaggaatcgattgcgtgtgcggcgccgccg
tcgccggaggagcgggactctcttttggagcgctgccggtcggtcttcgacgtggaggcc
gatccgcccgagacgttttccaagcgggacgcgaccgaaattcggctgctctcgcactgg
gtctacgcgcaccgggacgagctaacggcggtgcggtggacccctcgcacctcgccggcc
gacttggccgacgccatcgcggggcgggtccaggggcagccacaacaatcggcgtaa
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