Salinibacter ruber DSM 13855: SRU_1483
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Entry
SRU_1483 CDS
T00312
Name
(GenBank) type II DNA topoisomerase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sru
Salinibacter ruber DSM 13855
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sru03032
]
SRU_1483
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_1483
Enzymes [BR:
sru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SRU_1483
DNA replication proteins [BR:
sru03032
]
Prokaryotic type
DNA Topoisomerases
SRU_1483
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SRU_1483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Hydrolase_3
Motif
Other DBs
NCBI-ProteinID:
ABC45721
UniProt:
Q2S2H4
LinkDB
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Position
1847913..1850246
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AA seq
777 aa
AA seq
DB search
MPVTETIPLHETARERYLNYALSVITSRALPDIRDGLKPVQRRILFAMFDSLNLYPSKRH
RKSATVVGETMGKYHPHGDKAIYDAMVRMAQSFSLRAPLVDGHGNFGSLDGDSAAAMRYT
EAKLQPLAMEMLEGLRDETVDYRDNFDGSLEEPVVLPARVPNLLVNGASGIAVGMATNIP
PHNLGEVVDAALHMIEEPEVDTSTLVRDHIQGPDFPTGGRILNTQDELAEIYETGSGTIE
MRGAYRTKGKTRAIIESVPYGVDKSKIVEEIADHIAEENVPQLSNVRDESTDDVRIVLEL
KRGSDTEAAMAYLFKHTKLQKRFHVNLTCLVPTESTDVKAPKQVDLRTILRYFLDFRLDV
VTRRLQNELAELEARIHILEGFETIFDALDEAIEIIRASKNKADAAQRLMHRFQLDEEQT
DAILETQLYKLSQMEIEAIRDELGEKRARAEGIRRLLDDEDARWGIVKDELQDIRDEYTD
ERRSTLVGPGADMEYTEEDYIVDEDVHVIVTRDGWVKRQGTYSDLDAIRTRDGDEVGWAL
AGSTRATVGFFTNYGTCYTTRITEIPSTTGYGDPVQKLFSFDDGEHVVGVVSFDDRALPD
PVPAEPSEQGELFDPDDPDAPDQPYVVAISKGGQATRFTLDGYLEPSISTGRKYMRLEDG
DEVARVHLARGDENICLASHDGRALVFPVHQVSVYKGPAKGVRAIRLEDNDRVLDFALST
RARDGLTVETNNGREEIVRTTKFDATNRGAKGTLVIKRGYFAEVFPEPVEVPLHEAA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttaccgaaacgatcccgcttcacgagaccgcccgcgagcggtacctgaactat
gccctgtccgtcattaccagccgggcccttccggacatccgcgacggcctgaagccggtg
cagcgtcgcatcctctttgcgatgtttgacagcctgaacctgtacccgtccaagcggcac
cgcaagagcgcgacggtcgtgggggagacgatgggaaagtaccacccccacggcgacaag
gccatctacgacgccatggtgcgcatggcgcagtcgttttcgttgcgggcgccgctggtc
gacggacacggcaacttcgggtcgctcgacggtgacagcgcggcggcgatgcgctacacg
gaggccaagctgcagcccctggccatggagatgctggaggggctccgcgacgagacggtc
gactaccgcgacaactttgacggctcgctggaagagccggtcgtgctccctgcccgcgtc
cccaatctcctggtgaacggggcgagcggcattgccgtcggcatggcgacaaacatcccg
ccgcacaatctcggcgaggtggtcgacgcggccctccacatgattgaagagcccgaggta
gacacctcgaccctcgtccgcgatcacattcagggcccggactttccgaccggggggcgc
atcctaaacacgcaggacgaacttgcggagatctacgaaacgggctccgggacgatcgag
atgcgcggggcgtaccggacgaaggggaagacccgtgccatcatcgagtcggtgccctac
ggcgtggacaagagcaaaatcgtcgaggagattgccgaccacatcgccgaagagaacgtc
ccgcagctgtcgaacgtgcgcgacgagtcgaccgacgacgtgcgcatcgtgttggagctg
aagcggggctccgacacggaggcggcgatggcctacctgttcaagcacacgaagctccag
aaacgattccacgtcaacctcacctgcctcgtgccgaccgagagcacggacgtgaaggcc
ccgaagcaggtggatctccgtaccattctccggtacttcctcgacttccgactggacgtc
gtgacccggcgtctgcagaacgagctggcggagctggaggcgcggattcacatcttagag
ggcttcgagacgatcttcgacgccctcgacgaggccatcgagatcatccgggcctcgaag
aacaaagccgacgccgcccagcggctcatgcaccgcttccagctcgacgaagagcagacc
gacgcgattctggagacgcagctctacaagctctcgcagatggagattgaggcgatccgg
gacgaactcggggagaagcgggcccgggcggagggaatccgtcgcctgctcgacgacgag
gacgcgcgctggggcattgtcaaggacgagcttcaggacatccgcgacgagtacacggac
gagcgccgcagtacgctcgtcgggccgggggcggacatggagtacaccgaagaggattac
atcgtcgacgaggacgtccacgtcattgtcacgcgggacggttgggtgaagcggcaggga
acgtattcggacctcgacgccatccggacgcgcgacggagacgaggtggggtgggccctg
gccgggtcgacccgcgccaccgtcggcttttttacgaactacggcacctgctacaccacc
cgcatcacggaaatccccagcacgaccgggtacggcgatccggtgcaaaagctgttctcg
ttcgacgacggagagcacgtggtcggtgtcgtcagcttcgacgaccgcgcccttccggac
ccggtgccggccgagccgagtgagcagggcgagctcttcgacccggacgatcccgacgcg
ccggaccagccgtacgtcgtcgccatcagcaagggcgggcaggccacccgcttcaccctg
gacggctacctggagccctcgatcagcacgggccgtaagtacatgcgactggaggacggg
gacgaggtggcacgcgtccacctcgcccggggcgacgaaaacatctgccttgcctcccac
gacgggcgggcgttggtcttccccgtgcatcaggtatcggtgtataaggggcccgccaaa
ggcgtgcgcgccatccggcttgaggacaacgaccgcgtgctcgactttgccctaagcact
cgggcccgcgacgggctcacggtcgagacgaacaacggacgggaagagatcgtgcgcacg
acgaagttcgacgcgacgaaccggggggcgaagggcaccctcgtgatcaagcggggctac
ttcgcggaggtcttcccggagcctgtggaagtgcccctgcacgaagccgcgtag
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