Salinibacter ruber DSM 13855: SRU_1568
Help
Entry
SRU_1568 CDS
T00312
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sru
Salinibacter ruber DSM 13855
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sru03016
]
SRU_1568
Enzymes [BR:
sru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SRU_1568
Transfer RNA biogenesis [BR:
sru03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SRU_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Acb1
Motif
Other DBs
NCBI-ProteinID:
ABC44120
UniProt:
Q2S292
LinkDB
All DBs
Position
1950792..1951331
Genome browser
AA seq
179 aa
AA seq
DB search
MRLFTAIDLPDGFRNEVADLQAPSALDTRWTDPAQFHVTLRFIGDASPERAARYEQALAD
LTAPAARCEPYGLDVLPSRRSPRVLVLGLERTESLLALHTAVGDALEREGLSPDDRDYTP
HVTLARVGDTAPETVHAFLRTADVPSFPAFQADRFVLYESTLTSDGAVYDPRAIYPLNG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcttcacggcgattgatctccccgacggattccgaaacgaagtggccgacctg
caggcaccgtccgcgctggacacccgctggaccgatccggcccagtttcacgtgacgctc
cgcttcattggcgatgccagccccgagcgggcggcgcgctacgagcaggccctcgcggac
ctgaccgccccggccgcccgctgcgagccctacggcctggacgtgttgccgtcccggcgc
tctcctcgcgtcctggtgctcggcctggaacgcaccgagtccctcctggccctccacacg
gccgtcggcgatgccctcgaacgggaaggcctgtcgccagacgatcgcgactacacccct
cacgtcacgctcgcccgggtgggggacaccgccccggagacggtgcacgcgtttctgcga
accgcggacgtgccctcttttccggccttccaggccgaccggtttgtgctatacgaaagt
accctcacctcggacggggccgtttacgatccacgagcgatttacccgctcaacggatag
DBGET
integrated database retrieval system
