Salinibacter ruber DSM 13855: SRU_1635
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Entry
SRU_1635 CDS
T00312
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03030
DNA replication
sru03410
Base excision repair
sru03420
Nucleotide excision repair
sru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SRU_1635 (polA)
03410 Base excision repair
SRU_1635 (polA)
03420 Nucleotide excision repair
SRU_1635 (polA)
03440 Homologous recombination
SRU_1635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sru03032
]
SRU_1635 (polA)
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_1635 (polA)
Enzymes [BR:
sru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SRU_1635 (polA)
DNA replication proteins [BR:
sru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SRU_1635 (polA)
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SRU_1635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRU_1635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
PTS_IIB
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ABC43592
UniProt:
Q2S226
LinkDB
All DBs
Position
complement(2031404..2034184)
Genome browser
AA seq
926 aa
AA seq
DB search
MSPPDAAPDDSALYLIDAMSLAYRAHYIFISRPLINSKGQNTSAAYGFTNSLLKLIEDHD
IEHAAVVFDEGEEDTFRKEMYDDYKANRDPPPEELLENIPYIKEIVEGLDIPVLEVPGVE
ADDVIGALAKQAEADDADVVIVSPDKDFKQLLSDKVSIYKPAKGDQDFEIKTGDTFRDEY
GLDPAQFVDMLALMGDSSDNVPGVYGIGEKTAQKLLREYHSVENLIDHADDLSGKRAREG
MQEHAEEARLSKRLVRIRTELDVGLDWHELQRRELDEEKLTAVFQELEFDSFGDRLGIEG
GEGSEEETDEDDPDLQFDFGPYEKVQELDPEAVDYEVVRTEEELHAFADRLGEEARYAFD
AEATSRDPMTADLVGLSFSSEAERATYVPTPLPDDTPTDAVLDVLGPVLARDTEKLGHNL
KYDLLLLKQHGVEVGGTLFDTMVAHYLVAPEENHNLDDVARSVLNYKMVPIADLIGDETD
RDSMREVEVETAAPYACEDADISYRLADELEAQLEDGNVLDVAHDIEFPLVHVLATMEHT
GIRLDTDVLDEILAGLEERLSGIEEEVFELAGEEFNINSTQQLGEILFEKLDLPVVSKTP
TGKPSTKESVLQELSTEHEIPGLVLDWRSTYKLKSTYLDSLGELVHPETGRLHTSFNQTR
TATGRLSSSDPNLQNIPIRTEMGRQIRRAFVPKDGWALLSADYAQIELRILAAMSGDDAM
RATFQEGGDIHTDAAARVYGIDPEDVTPEQRSKAKEVNYGIPYGISPWGLAQRMRMPVDE
AQDIIKQYRKSYPGVSQLLNELVEKAQDKGYAETLLGRRRYLPDIDSSNSNARSAAERVA
VNMPIQGTQADMIKIAMNRIHDRLAGDDWATQMLLQVHDELVFEVPPDELDAAQTMIDDE
MRDALPLDDVPVTVDMDTGDNWLEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtctccccccgacgccgcccccgatgacagtgccctgtacctcatcgacgcgatgtcg
ttggcctatcgggcgcactacatcttcatcagtcggcccctgatcaactccaagggccag
aatacctccgcggcgtacgggttcaccaactccctgctcaagttgatcgaggaccacgac
atcgagcacgccgcggtggtgttcgacgagggcgaagaggacacctttcggaaggagatg
tacgacgactacaaggccaaccgggacccgccgccggaggagctgctggaaaacattccc
tacatcaaggagatcgtagaggggctcgacattccggtgctggaggtgccgggcgtggag
gccgacgacgtcattggggcgctcgcgaagcaggccgaggcggatgacgccgacgtggtg
atcgtctcgcccgacaaggacttcaagcagctgctcagcgacaaggtctcgatctacaag
cccgccaagggggaccaggactttgagatcaagacgggagacaccttccgggacgagtat
ggcctggacccggcccaattcgtcgacatgctggccctgatgggcgacagcagcgacaac
gtgcccggcgtctacggcatcggggagaagaccgcccagaagctcctgcgggagtaccac
tccgtggaaaacctgatcgaccacgccgacgacctgagcggcaagcgggcccgggagggc
atgcaggagcacgccgaggaggcgcgtctcagcaaacggctcgtccgcatccgcaccgaa
ctggacgtgggcctcgactggcacgagctccagcggcgcgagctggacgaggagaagctt
acggccgtcttccaggagctggagttcgactccttcggcgaccgcctcggtatcgagggg
ggcgaggggtccgaagaggagacggacgaggacgacccggacctgcagttcgacttcggc
ccctacgagaaggtgcaggagctcgacccggaggccgtcgattacgaggtcgtccggacg
gaggaggagctccacgcctttgccgaccggctcggcgaggaggcccgctacgcgttcgac
gcggaggcgacctcccgagacccgatgacggcggacctcgtgggcctgtcgttcagctcc
gaggcggagagggccacctacgtcccgaccccgcttcccgacgacaccccgaccgacgcg
gtcctcgacgtgctggggccggtgctggcgcgggacaccgagaagctggggcacaatctg
aagtacgacctgctcctgttgaagcagcacggcgtcgaggtgggcgggacgctgttcgat
acgatggtggcccactacctcgtggccccggaggaaaatcacaacctggacgacgtggcg
cggtcggtgctcaactacaagatggtccccattgcggacctgattggggacgagaccgac
cgggactcgatgcgggaggtggaggtggagacggccgccccctacgcctgcgaggacgcc
gacatttcgtaccgcctggcggacgagctggaggcgcaactggaggacggaaacgtgctc
gacgtggcccacgacatcgagtttccgctcgtgcacgtgctcgccacgatggagcacacc
gggattcggctcgacacggacgtgctcgacgaaatcctggccgggctggaggagcgcctc
agcggcatcgaggaggaggtgttcgagctggccggggaagaattcaacatcaactcgacc
cagcagctcggcgaaattctgttcgagaagctcgaccttccggtcgtctccaagacgccg
accgggaagccgtccaccaaggagagtgtgcttcaggagctctccaccgagcacgaaatt
ccggggctcgtcctggactggcggtcgacctacaagctcaagagcacctacctcgacagc
ctcggcgagctcgtccaccccgagacggggcgcctgcacaccagcttcaatcagacccgc
acggccaccgggcggctctcgtcgagcgacccgaacctccaaaacattcccatccgcacc
gagatgggccggcaaatccggcgcgccttcgtcccgaaggacggatgggccctgctctcg
gccgactacgcgcagatcgagctgcgcatcctcgccgccatgagcggggacgacgccatg
cgggcgacctttcaggaggggggcgacatccacaccgacgccgccgcgcgggtctacggc
atcgaccccgaagacgtgacgccggagcagcgcagcaaggcgaaggaggtcaactacggc
attccgtacggcatctcgccgtgggggctcgcccagcggatgcggatgccggtcgacgag
gcgcaggacatcatcaagcagtaccggaagtcgtaccccggggtctcgcagctcctgaac
gagctggtggagaaggcccaggacaagggctacgcggagacgctcctggggcgccggcgc
tacctccccgacatcgacagctcgaacagcaacgcgcgcagcgctgccgagcgggtggcc
gtcaacatgcccattcagggcacgcaggcggacatgattaagattgcgatgaaccgcatc
cacgaccggctcgccggcgacgactgggcgacgcagatgctgctgcaggtgcacgatgaa
ctcgtgtttgaggtgcccccggacgagctggacgccgcacagaccatgatcgacgacgag
atgcgcgacgccctgccgctcgacgatgtgcccgtaaccgtcgacatggacaccggcgac
aactggctcgaagcccactga
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