Salinibacter ruber DSM 13855: SRU_2315
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Entry
SRU_2315 CDS
T00312
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru03420
Nucleotide excision repair
sru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SRU_2315
03430 Mismatch repair
SRU_2315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sru03400
]
SRU_2315
Enzymes [BR:
sru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SRU_2315
DNA repair and recombination proteins [BR:
sru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SRU_2315
MMR (mismatch excision repair)
Other MMR factors
SRU_2315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
RNase_T
UvrD_C_2
AAA_30
Rv2179c-like
Viral_helicase1
AAA_11
RNase_H_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABC45440
UniProt:
Q2S065
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All DBs
Position
2883011..2886265
Genome browser
AA seq
1084 aa
AA seq
DB search
MPSRPADWPDLNPDQRAAVTASMDPQLVVAGPGTGKTRVLVCRAAHLIEHEAVTPSRLVL
VTFTRRAAQQLTSRLAALVGPEAQHVRAGTIHHFCYKTLRAHSAPAGVPDDFIVVDDTVT
DAFWQRWYEAHERWCEANDLHSYRQVKTHVSRIKLGIDTVSGRLTEGLRAYGEMLGDRGA
LDFDDLLVKTRDLLRSHPDVRADLVDETRAVLVDEFQDTDPVQFDIIRRLGEAGAHLYCV
ADDDQSVYRFRGARPANLRRYIDRFDCSAERGTRHVLTTNYRSNRSIYAVAEAVLDADER
LKQRGDIRTSNAGTQPVQLVACDDPEAERTHVLRQLRDWLDDGAERSDLAVLTRWNRRLA
ALERACLRAGLACETSQSEALLDTPPAQKLHALLRVVDARRRGRPLDAPMTELLSHLLPD
DTMARLRDFGERSMPDATLWTAFQTVVSNEQARRSAGLDSATDRLDQTYATITNLLQNTQ
EDGLTIGAFTRTALRQLGDPLQLLRRYADTLTDPASRPSVRQAGTVLDEWRRAQARDARA
GDPPRLLLHHRTPQITRLWRQLVRRALDLETDPPAPLPEMQEALFARPADEGIPPLGADD
VVLTNDLEALLRWAERTGAFSGSTDTPQILLLAPDGALPSGQKTLLGVDPENVHVVDPES
TFHSPSVRLVKLLQMTSGPSAPEPLFPEYVMVDLEATSTDPRHCRVAEIGALKVRDGTVV
DRFSELVQLPEDLTADERETLRTVCGLDPASDFDEARPEAAVWADFCAFVDGAPLVAHNG
QRYDFRVLRRLANTHEADAHWATTYDLLPAAHELFPDLRRYDAAHLRETLLDDDADTAHR
ALADCEDQQRILARMQEERARRRRRLAHEPLLPLLVAALTYESPAPEALSDDAQVFLQVG
HTWALRDASPAGDDLRSLLPRALPDRLRQHALYTLIDEEALLTASAGLQPGLARRLAALF
APYADRPLRSKALADLLAHLALWGEETTPQGEDVITLSTYHSAKGLEFERVVCMDVHDNA
FPPYFARDPKERRESRRLLYVGMTRAERHLVLTYPKRERGYDRRPTAFLDAAPDELLQVT
DAAP
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcccgccccgccgactggcccgacctcaaccccgaccagcgggccgccgtgacg
gcgtcgatggatccgcagctcgtggtggccgggccggggaccggcaagacccgcgtcctc
gtgtgccgggccgcccacctcatcgagcacgaggccgtgacgccctcccgcctcgtcctg
gtcaccttcacgcggcgcgccgcgcagcagctcacgagccgcctcgccgccctcgtgggc
ccggaggcgcagcacgtccgggcgggcaccattcaccacttctgctacaaaaccctccgc
gcccattcggccccggcgggcgtgcccgacgacttcatcgtggtcgacgacacggtcacg
gacgccttctggcagcgctggtacgaggcgcacgagcgctggtgcgaggcaaacgacctc
cacagctaccgccaggtcaaaacccacgtcagccgcattaagctcgggatcgacacggtg
tcggggcggctcaccgaaggcctgcgggcctacggcgagatgctcggggaccggggcgcg
ctcgacttcgacgacctgctcgtcaagacgcgcgacctgctgcgcagtcacccggacgtg
cgggccgacctcgtggacgagacgcgggcggtcctcgtcgatgaatttcaggacaccgac
ccggtgcagttcgacatcatccgccgcctcggcgaggcgggcgcccacctctactgcgtg
gccgacgacgaccagtccgtctaccgcttccgcggggcgcggcccgccaacctgcgtcgc
tacatcgaccgcttcgactgcagcgccgagcgcggcacccgccacgtcctcaccaccaac
taccgctcaaaccgctcgatctacgcggtggccgaggcggtgctcgacgccgacgagcgc
ctcaaacagcgcggcgacattcgcacgtcgaacgccggcacacagccggtgcagctggtc
gcctgcgacgaccctgaggccgaacggacccacgtgctccggcaactgcgcgactggctg
gacgacggggccgagcggagcgacctggccgtcctgacccgctggaaccgccgcctcgcg
gccctggaacgggcgtgcctccgggccggcctcgcctgcgagacgagccagagcgaggcg
ctcctggatacccctccggcgcagaagctgcacgccctgctccgcgtcgtcgatgcccgc
cgtcgcggccggccgctcgacgcccccatgacggagctgctgtcccacctgctgccggac
gacacgatggcccggctgcgcgacttcggcgagcggagcatgccggacgcgaccctctgg
acggccttccagaccgtcgtctccaacgagcaggcccgccgcagcgccggcctcgactcg
gccacggaccgcctcgaccagacctacgccacgatcaccaacctcctgcagaacacacag
gaggacggcctcaccatcggcgccttcacccgcactgcccttcggcagctcggagatccc
ctccagctgctccgccgctacgccgacaccctgactgatccggcctctcgtccgtccgtc
cgccaggccggcacggtcctcgacgagtggcgccgggcccaggcccgcgatgcgcgggcc
ggggacccgccccgcctgctcctgcaccaccgcacgccccagatcacgcggctctggcgg
cagctggtgcggcgggccctcgacctcgaaacggatccgcccgcgccgctgcccgaaatg
caggaggccctcttcgcccgccccgccgacgaaggcattccgccactcggggccgacgac
gtggtcctcacgaacgacctggaggcgctcctccgctgggccgagcggaccggggccttt
tcgggatcgaccgatacgccccagatcctcctgctcgcgcccgacggcgccctgccgtcc
ggccagaagacactgctcggggtcgacccggagaacgtgcacgtcgtggatcccgagtcc
acctttcatagcccctcggtccggctggtcaagctcctgcagatgaccagcggcccgtcc
gcccccgagccgctctttccggagtacgtgatggtcgacctcgaagccacgagcaccgac
ccgcgccactgccgcgtcgccgagattggggcgctcaaggtgcgagacggaaccgtggtg
gaccgattctcggagctcgtgcagttgcccgaggacctgacggccgacgagcgcgagacg
ctccgcacggtgtgcggcctggatccggcgtcggacttcgacgaggcccggcccgaggcg
gcggtctgggccgacttctgtgccttcgtggacggggcgcccctcgtcgcccacaacggc
cagcgctacgacttccgcgtcctgcgccgcctcgccaacacccacgaggccgacgcccac
tgggccacgacgtacgacctgctgcccgccgcacacgagctgtttcccgaccttcgccgc
tacgacgccgcgcacctccgcgagacgctcctggacgacgacgcggataccgcccatcgc
gccctggccgactgtgaggatcagcagcgcatcctggcgcgcatgcaggaggagcgcgcg
cgccggcgccgccgtctggcccacgagccgctcctgccgctcctcgtggccgccctcacc
tacgaatcccccgcccccgaggccctgtcggacgacgcccaggtctttttgcaggtgggg
catacgtgggccctgcgcgacgcctcccccgccggtgacgacctgcgctcgctcctgccc
cgggccctgccggatcgcctccgccagcacgcgctctacacgctgatcgacgaggaggcg
ctgctcacggcctctgccggcctccagcccggcctcgcccgccgcttggccgccctcttc
gccccctacgccgaccgcccgctccggagcaaggcgctggcggacctgcttgcgcacctc
gcgctctggggcgaagagacgacgccgcagggggaggacgtgattacgctctccacctac
cacagcgccaaggggctcgagttcgagcgcgtcgtctgcatggacgtgcacgacaacgcc
ttcccgccctactttgcgcgcgaccccaaggagcgccgcgagagccgtcgcctcctgtac
gtgggcatgacgcgcgccgagcgccacctcgtgctcacctacccgaagcgggaacgcggc
tacgaccggcgccccaccgccttcctcgacgccgcccccgacgagctcttgcaggtcacg
gacgccgccccctga
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