Salinibacter ruber DSM 13855: SRU_2380
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Entry
SRU_2380 CDS
T00312
Name
(GenBank) AMP-binding enzyme, putative
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru00061
Fatty acid biosynthesis
sru00071
Fatty acid degradation
sru01100
Metabolic pathways
sru01212
Fatty acid metabolism
sru02024
Quorum sensing
sru04146
Peroxisome
Module
sru_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SRU_2380
00071 Fatty acid degradation
SRU_2380
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SRU_2380
09145 Cellular community - prokaryotes
02024 Quorum sensing
SRU_2380
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sru01004
]
SRU_2380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sru04147
]
SRU_2380
Enzymes [BR:
sru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SRU_2380
Lipid biosynthesis proteins [BR:
sru01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SRU_2380
Exosome [BR:
sru04147
]
Exosomal proteins
Exosomal proteins of breast milk
SRU_2380
Exosomal proteins of breast cancer cells
SRU_2380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABC45099
UniProt:
Q2S002
LinkDB
All DBs
Position
complement(2958635..2960533)
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AA seq
632 aa
AA seq
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MPAQVEFDTIPEMVLRLCDRYRGRERPVLRHKVRGDGWQEITWEGFQDRVQALAGYLHRQ
SVREGDRVALLSENRPEWAVSDLGTQLIGAANVSIYTSLPPSKVAHILRDSGAKVCIVSV
PVQRKKIEEIADTCPELEEVIVMSETADDPPVPMTHWDDALAAGREHWSEHEAELTGIAE
SIAPGDTSALIYTSGTTGQPKGVVLTHRNFCSNVKGALRRIPIGEDDHHLSFLPLSHAFE
RTAGHTAVLAAGATISYAESIEAVSQNLQEVQPTLMISVPRMFEKVYKRVTKQAKEGGPL
KQALFDWAVGVGERHAEAQQKTGSGPNLLLRGQRAVAHRLVFSKLHEKLGGNLRFAASGG
AALPEEIGTFFQAAGVTIIEGYGLTETAPVLTINPLDAPRYGTVGHVMPGVTVAIQPLEE
NEPAGAVSGSDYPTSLSTPEGEILVKGPNVMKEYWNQPEETRAAFGPDGWYHTGDVGRFE
EGYLKITDRIKHMIVTEGGKNVYPGPIEETFKTKNWINQIVVVGEGRPFLAALVVPDFDA
LRMRARDEGIDESTCDDAELLHHDAAQALFQDVFTAYNRDAAAHEKIRNFRLLGEPFTVE
EGTLTPTLKLRRSVIRERHADLIDEMYEEFGR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacaggtcgaattcgacaccattcccgagatggttctccgcctttgtgatcgg
taccgagggcgggagcggccggtgctgcggcacaaggtccggggcgacgggtggcaggaa
atcacctgggagggcttccaggatcgggtgcaggccctggccggctacctgcatcggcag
agtgtgcgcgagggcgatcgggtcgccctgctctcggaaaaccgtccggagtgggccgtc
agcgacctggggacgcagctcattggggcggcgaacgtctcgatctacacgtcccttccg
ccctcgaaagtagcccacatcctccgggactccggggccaaagtgtgcatcgtgtccgtg
ccggtccagcgcaagaagatcgaggagattgcggacacgtgccccgagctcgaagaggtg
atcgtaatgagcgagacggcggacgacccgcccgtccccatgacgcactgggacgatgcc
ctggcggcgggccgcgagcactggagcgagcacgaggcggagcttaccggcattgcggag
tcgatcgcgccgggggacaccagcgccctcatctacacgagcggcaccaccggccagccg
aagggggtggtgctaacccaccgcaacttctgctcgaacgtaaagggcgccctgcggcgc
atccccatcggggaggacgatcaccacctttcgttcctgcccctctcgcacgccttcgag
cggacggcgggccacacggccgtgctcgccgccggggccaccatcagctacgcggaaagc
atcgaggcggtcagccaaaacctccaggaggtgcagccgaccctcatgatctcggtgccg
cgcatgttcgagaaggtgtacaaacgcgtgacgaagcaggccaaggagggaggacccctc
aagcaggccctcttcgactgggcggttggggtgggcgaacggcacgctgaggcccagcag
aagaccggctcgggaccgaacctgctgttgcgtgggcagcgggcggtggcccaccgtctg
gtcttttccaaactgcacgagaaactcggtggaaacctccggttcgccgcctccggcggg
gcggcgctgcccgaagagattggcaccttcttccaggccgcgggcgtgaccatcatcgag
ggctacggccttacggagacggcccccgtcctcacgatcaatcccctggacgccccccgc
tacggcaccgtcggccacgtcatgcccggcgtgacggtcgccattcagccgctggaggag
aacgagccggccggggcggtcagtggcagcgactaccccacatccctctccacgccggaa
ggggagattctggtgaagggccccaacgtgatgaaggagtactggaatcaacccgaagag
acacgggcggccttcggcccggacgggtggtatcacaccggcgacgtcggacgcttcgag
gagggctacctcaagattacggaccggatcaagcacatgatcgtcacggagggcggaaag
aacgtctatcccggcccgatcgaggagacgtttaagaccaaaaactggatcaaccagatc
gtcgtggtgggggaggggcgtccgtttctcgcggccctggtggtgcccgacttcgacgcc
ctccgcatgcgggcacgagacgaggggattgacgagtccacctgtgacgatgcggagctg
ctgcaccacgacgcggcgcaggccctgtttcaggacgtctttacggcctacaaccgcgac
gcggcggcccacgagaaaattcgcaacttccgcctcctcggcgagccgttcaccgtcgag
gaggggacgctcacccccacgctcaagctccgtcgcagcgtcatccgggagcgccacgcg
gacctcatcgacgagatgtacgaggagttcggccggtga
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