Salinigranum rubrum: C2R22_01065
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Entry
C2R22_01065 CDS
T05289
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K09714
HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
srub
Salinigranum rubrum
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srub03000
]
C2R22_01065
Transcription factors [BR:
srub03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2R22_01065
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TFX_C
Sigma70_r4
HTH_31
GerE
HTH_23
RepB
HTH_3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AUV80419
UniProt:
A0A2I8VHA6
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Position
complement(222299..222808)
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AA seq
169 aa
AA seq
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MDDTGAGDGDRPGLDIDIDTLLDRTGFDPETSVLTRRQAEVLLLRERGVRQTTIADHIGT
SRANVSSIEASARANVEKARETVAFAEALSAPVRVEVDVGTDLYDVPKLVYDACDEAGVK
VNHTAPDLMKAVSDAAGEAVQGREVRDAILVGVTSSGNVRVRRSAEQDG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacgggagccggggacggcgacaggcccggtctcgacatcgacatcgacacc
ctcctcgaccggaccgggttcgaccccgagacgagcgtcctgacccgccggcaggcggag
gtcctcctgctccgcgaacggggggtgcgacagacgaccatcgccgaccacatcggcacc
tcgcgggcgaacgtctcgagcatcgaggcgagcgcccgtgcgaacgtcgagaaggcccgc
gagacggtcgccttcgccgaggcgctgtcggcccccgtcagggtggaagtcgacgtcgga
accgacctctacgacgtgccgaaactcgtctacgacgcctgcgacgaggcgggcgtgaag
gtgaatcacaccgcgccggacctcatgaaggccgtgagcgacgccgcgggcgaggcggtc
cagggccgggaggtgcgagacgctatcctcgtcggcgtgacgagcagcgggaacgtccgc
gtccgacggtccgcggagcaggacggctga
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