Salinigranum rubrum: C2R22_01115
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Entry
C2R22_01115 CDS
T05289
Name
(GenBank) isopentenyl pyrophosphate isomerase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
srub
Salinigranum rubrum
Pathway
srub00900
Terpenoid backbone biosynthesis
srub01100
Metabolic pathways
srub01110
Biosynthesis of secondary metabolites
Module
srub_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C2R22_01115
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
C2R22_01115
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
srub01006
]
C2R22_01115
Enzymes [BR:
srub01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
C2R22_01115
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
C2R22_01115
2.5.1.29 geranylgeranyl diphosphate synthase
C2R22_01115
Prenyltransferases [BR:
srub01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
C2R22_01115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AUV80428
UniProt:
A0A2I8VES2
LinkDB
All DBs
Position
complement(233425..234267)
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AA seq
280 aa
AA seq
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MEYLERRVGLVNDRLEEVVEAVDPPELSDELAHVALSGGKRVRPAVTILACEAVGGQPSQ
AVDFAVAVELVHNASLVIDDIIDRSGVRRGKPSAWAEYGYGPAIICSDGLLGEAFALLSV
DDQATQIVSEAMVELSEGEATELVARPTTDDEYMTLARRKTGVLFRAAAELGVVAAGGDP
VTVEAFGEYAERVGVAFQIRDDVLDATADADDLGKPTGQDEAMDRPSLVQVTGIEPEEAN
DRARAEADRALNALDNADPEETAALGYLRDLAEFVVVRER
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagtatctggagcgccgggtcgggctcgtgaacgaccggctcgaagaggtggtcgag
gcggtcgacccgcccgagctgtccgacgagctcgcacacgtggcgctctccggcgggaag
cgcgtccgcccggcggtcaccatcctcgcgtgtgaggcagtgggcggccagccctcgcag
gccgtggacttcgccgtcgccgtcgaactcgtccacaacgcctcgctcgtcatcgacgac
atcatcgaccgctcgggggtcaggaggggaaagccgagcgcatgggccgagtacggctac
ggcccggccatcatctgctcggacggcctcctgggcgaggcgttcgcgctcctctcggtc
gacgaccaggcgacgcagatcgtctccgaggcgatggtcgaactgagcgagggcgaggcc
acggaactcgtggcccgtccgactaccgacgacgagtacatgacgctcgcccgccggaag
acgggcgtgctgttccgcgcggcggccgaactcggcgtcgtcgcggccggcggcgacccg
gtgaccgtcgaggccttcggcgagtacgccgagcgcgtgggggtggcctttcagatccgc
gacgacgtcctcgacgccaccgccgacgccgacgacctcgggaagccgaccggccaggac
gaggcgatggaccgcccctcgctggtgcaggtgacgggcatcgagcccgaggaggcgaac
gaccgcgccagggcggaggccgaccgggcgctgaacgcgctcgacaacgccgaccccgag
gagacggcggcgctggggtatctgcgcgacctcgcggagttcgtggtcgtccgcgagcgc
tga
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