KEGG   Salinigranum rubrum: C2R22_01900
Entry
C2R22_01900       CDS       T05289                                 
Name
(GenBank) ribosome biogenesis/translation initiation ATPase RLI
  KO
K06174  ATP-binding cassette, sub-family E, member 1
Organism
srub  Salinigranum rubrum
Brite
KEGG Orthology (KO) [BR:srub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:srub03009]
    C2R22_01900
Ribosome biogenesis [BR:srub03009]
 Eukaryotic type
  Pre-40S particles
   Other pre-40S particles
    C2R22_01900
SSDB
Motif
Pfam: ABC_tran SMC_N Fer4_RLI AAA_21 AAA_22 AAA_16 AAA Rad17 AAA_14 RNA_helicase Fer4_6 AAA_29 RsgA_GTPase Fer4 AAA_24 nSTAND3 NACHT AAA_23 NB-ARC Fer4_7 Fer4_10 Fer4_21 Fer4_9
Other DBs
NCBI-ProteinID: AUV80567
UniProt: A0A2I8VF62
LinkDB
Position
390901..392730
AA seq 609 aa
MADDSIAVVDLDRCQPDRCNYECAKYCPPNRTGKDCIVTRGDHYEEDEPYEGDPDQIRIS
EEICLGETCGICVEKCPFDAIEIINLPTELDEDPVHRYGENAFALYGLPVPDAGTVTGIL
GPNGIGKSTAVHILADELVPNLGNYGDEPGWEPVLDRYRGSGLQNYIEALLDDEVTVARK
PQYVDQIPKQFDGKTNELLAATDERGVLDELVDRLGIRPVIDQPIDTLSGGELQRVALAA
TLARDRDFYFLDEITPYLDIGQRVTAARLIQELAETEDRAILVVEHDLAILDLLADSLHI
GYGRPGAFGVITDPKSVRNGINEYLKGYLTNENMRIRPDAITFEEHAPRETTKSAPLVEY
PSLEKSYGEGEFSLGVEGGTIYHSEVLGIVGPNGIGKSTLAKLFAGELEPDTGELDFRLD
IAYKPQYIEIDQPMRVDAFLSSITSDFGSSLWKTEIAGPLQLERIMEQNLSDLSGGERQR
VAIAATLSEDADLYVLDEPSAHLDVEQRVRATTAIRRYAENHDATVMVIDHDIYMIDLLA
DRLMVFDGEPAVEGHAETPQEMREGMNDFLSDLDITFRRDERTGRPRINKPDSQLDRKQK
KAGEYYYAP
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggccgacgacagcatcgcggtggtcgacctcgaccgctgccagcccgaccggtgtaac
tacgagtgcgcgaagtactgcccgcccaaccgcacggggaaggactgcatcgtcacccgc
ggcgaccactacgaagaggacgaaccgtacgagggcgaccccgaccagatcaggatttcc
gaggagatctgtctcggggagacctgcggcatctgcgtggagaagtgtccgttcgacgcc
atcgagatcatcaacctcccgaccgaactggacgaagaccccgtccaccgctacggcgag
aacgccttcgcgctctacgggttaccggtccccgacgcgggcaccgtcacgggcatcctg
ggaccgaacggcatcgggaagtcgacggcggtccacatcctcgcggacgaactcgtcccc
aatctgggtaactacggcgacgaacccgggtgggagccggtcctcgaccgctaccgcggc
tcgggattgcagaactacatcgaggcgctcttggacgacgaggtgaccgtcgcccgcaag
ccgcagtacgtcgaccagattcccaagcagttcgacggcaagacgaacgaactcctcgcc
gccacggacgagcggggcgtcctcgacgaactcgtcgaccgcctcggcattcggcccgtc
atcgaccagcccatcgacaccctctcgggaggggaacttcagcgggtcgcgctcgcggca
actctggcgagagaccgcgacttctacttcctcgacgagattaccccctacctcgacatc
ggtcagcgcgtcaccgccgcccgcctcatccaggaactggccgagaccgaggaccgggcc
atcctcgtcgtcgaacacgacctcgccatcctggatctcctggcggattcgctccacatc
ggctacggccgaccgggcgcgttcggtgtcatcaccgaccccaagagcgtccggaacggc
atcaacgagtacctcaagggctacctgaccaacgagaacatgcgcattcggcccgacgcc
atcacgttcgaggaacacgccccgcgagagacgacgaagagcgcgcccctcgtggagtac
ccctcgctcgaaaagtcgtacggcgagggagagttctcgctcggcgtcgagggcgggacc
atctaccactccgaggtgctgggcatcgtcggcccgaacggcatcgggaagtccaccctg
gcgaagctgttcgccggcgaactcgaacccgacacgggcgaactcgacttccgactcgac
atcgcctacaagccccagtacatcgagatcgaccagccgatgcgcgtcgacgccttcttg
tcctccatcacgagcgacttcggctcctcgctgtggaagaccgaaatcgccggaccgctc
cagctagagcggatcatggagcagaacctctcggacctctccggcggggagcgccagcgc
gtcgccatcgccgccaccctctctgaggacgcggacctctacgtgctggacgagccctcg
gcgcacctcgacgtcgaacaacgggtgagagcgaccaccgcgattcgacgctacgcggag
aaccacgacgcgaccgtgatggtcatcgaccacgacatctacatgatcgacctgctggcg
gaccggctgatggtgttcgacggcgaacccgccgtcgagggtcacgccgagacgccccag
gagatgcgcgagggcatgaacgacttcctctcggacctcgacatcaccttccgccgcgac
gagcggacgggccgtccccgcatcaacaagcccgactcccagctcgaccggaaacagaag
aaggcgggcgagtactactacgcgccctga

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