Salinigranum rubrum: C2R22_02355
Help
Entry
C2R22_02355 CDS
T05289
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
srub
Salinigranum rubrum
Pathway
srub03030
DNA replication
srub03420
Nucleotide excision repair
srub03430
Mismatch repair
srub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2R22_02355
03420 Nucleotide excision repair
C2R22_02355
03430 Mismatch repair
C2R22_02355
03440 Homologous recombination
C2R22_02355
03460 Fanconi anemia pathway
C2R22_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srub03000
]
C2R22_02355
03032 DNA replication proteins [BR:
srub03032
]
C2R22_02355
03400 DNA repair and recombination proteins [BR:
srub03400
]
C2R22_02355
Transcription factors [BR:
srub03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
C2R22_02355
DNA replication proteins [BR:
srub03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
C2R22_02355
DNA repair and recombination proteins [BR:
srub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
C2R22_02355
MMR (mismatch excision repair)
C2R22_02355
DSBR (double strand breaks repair)
HR (homologous recombination)
C2R22_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
REPA_OB_2
OB_MEIOB_N
HROB
Ssb-like_OB
DUF5666
AF-4
Motif
Other DBs
NCBI-ProteinID:
AUV80639
UniProt:
A0A2I8VHW5
LinkDB
All DBs
Position
483071..484564
Genome browser
AA seq
497 aa
AA seq
DB search
MGVIEDVYEDVSPDVDFEEFEAAVQEKVEQMGGLADEETAAMLVAHELEDAGGEVSGIAD
IEPGMDEVKFVAKVVSIGEIKTFERDGEDEDGKVVNVEVADETGRIRAALWDDAAEAAVD
ELEVGQVLRIAGRPKDGYNGVEVNVDRVEPDSETAVDVQVLDTYRVEDLSLGLSDVNLSG
RVLATDSVRTFDRDDGSEGKVANLVLGDPTGRVRVTLWDERADLATEFAVGESVEVVDGY
VRERDGDLELHVGNRGGVEPIDEDVEYVPETDPIAGLEIGQTVDVAGGVIELDEKRTFDR
DDGSQGQVRNVRIKDDTGDIRVALWGDKADTEMDLGQYAVFTDVQVKEGWQDDLECSVNW
RSTVSVLDERPDDAPTHDAPAAATATSGGSAEGQGSLSSFDSSAGSSSTSSSSSSSSSSA
SSSAGAAAATGPADDANADAPEEIEFTGTVVQAGSPVVLDDGTETYSIDTDASLRLGEEV
TVRGRVRDGRIDAEDVF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcatcgaggatgtctacgaggacgtctccccggacgtcgacttcgaggagttc
gaggccgcagtccaggagaaggtcgaacagatgggggggctcgcggacgaggagacggcc
gcgatgctcgtcgcccacgagctggaggacgccggcggcgaggtgtcgggcatcgccgac
atcgaacccggcatggacgaggtgaagttcgtcgccaaagtggtcagcattggcgaaatc
aagacgttcgagcgcgacggcgaggacgaagacggaaaggtcgtcaacgtcgaagtcgcg
gacgagaccggccgcatccgcgccgcgctgtgggacgacgccgccgaggcggccgtcgac
gaactcgaagtcggtcaggtgctccgcatcgcgggccgtccgaaggacgggtacaacggc
gtcgaggtgaacgtcgaccgtgtcgaacccgattcggagacagcggtcgacgtgcaggtg
ctcgacacctaccgggtggaggacctctcgctcggactctcggacgtgaacctctcgggg
cgagtgctcgcgacggactcggtccggacgttcgaccgcgacgacggctccgaggggaag
gtcgccaacctcgttctcggcgaccccaccggtcgcgtgcgggtcacgctctgggacgag
cgcgcggacctcgcgaccgagttcgcggtcggcgagtccgtcgaggtggtcgacggctac
gtccgcgagcgcgacggcgacctcgaactccacgtcggcaaccgcgggggcgtcgaaccg
atcgacgaggacgtcgagtacgtccccgagacggaccccatcgccggactggagatcggt
cagaccgtcgacgtcgccgggggcgtcatcgaactcgacgagaagcggacgttcgaccgc
gacgacggttcgcagggccaagtgagaaacgtgcggatcaaagacgacaccggagacatc
cgcgtcgcgctctggggcgacaaagccgacacggagatggacctcgggcagtacgccgtc
ttcaccgacgttcaggtcaaagagggttggcaggacgacttggagtgttcggtcaactgg
cgctcgacggtctcggtgctcgacgagcgacccgacgacgccccgacacacgacgcaccc
gccgccgcgaccgcgacgtccggcggtagcgccgagggacaggggagcctcagctcgttc
gactcctcggccggttcgtcctccacttcgtcttcgtcgtcctcgtcgtcttcgtccgct
tcgtcgtctgccggcgccgccgcggccaccggtccggccgacgacgcgaacgcggacgca
cccgaagagatcgagttcacgggcacggtcgttcaggccggtagccccgtcgtgctggac
gacggcaccgagacgtacagcatcgacaccgacgccagcctccggctcggcgaggaggtg
accgtccgcggacgcgtccgtgacgggcgcatcgacgccgaagacgtcttctga
DBGET
integrated database retrieval system
