Salinigranum rubrum: C2R22_04385
Help
Entry
C2R22_04385 CDS
T05289
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
srub
Salinigranum rubrum
Pathway
srub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
C2R22_04385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srub03021
]
C2R22_04385
03019 Messenger RNA biogenesis [BR:
srub03019
]
C2R22_04385
Transcription machinery [BR:
srub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
C2R22_04385
RNA polymerase I system
C2R22_04385
Messenger RNA biogenesis [BR:
srub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
C2R22_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
SH3_KIN17_C
KOW4_SPT5
DUF6093
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
AUV80990
UniProt:
A0A2I8VGE9
LinkDB
All DBs
Position
920799..921251
Genome browser
AA seq
150 aa
AA seq
DB search
MPIFAVKTTASQERTVADMIANREESEIHAVLAPDSLTSYVMVEADNNAVIERVLEEIPH
ARGLVSSGGQVGRSSMAEVEHFLSPTPDVEGIAEGDIVELVSGPFKGEKARVQRIDEGKD
QVTVELYEATVPIPVTVRGDQIRVLDSEER
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgccgatattcgccgtcaagaccaccgcgagccaggaacgcacggtggccgacatgatc
gccaaccgcgaggagtccgagattcacgccgtgctcgccccggactctttgacctcgtac
gtgatggtcgaggccgacaacaacgcggtcatcgaacgcgtcttagaggagattccgcac
gctcgcggcctcgtcagttcaggcggacaggtcggccggtcgtcgatggccgaggtcgag
cacttcctctcgccgacgcccgacgtcgagggcatcgccgagggcgacatcgtcgaactc
gtctccgggccgttcaagggcgagaaggcccgcgtccagcgcatcgacgagggcaaggac
caggtcaccgtcgaactgtacgaggcgaccgttccgattccggtgacggtccgcggcgac
cagatccgcgtgctcgacagcgaggagcgatag
DBGET
integrated database retrieval system
