Salinigranum rubrum: C2R22_04775
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Entry
C2R22_04775 CDS
T05289
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
srub
Salinigranum rubrum
Pathway
srub03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C2R22_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srub03021
]
C2R22_04775
Transcription machinery [BR:
srub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
C2R22_04775
Prokaryotic type
Archaeal type
TFB
C2R22_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Zn_ribbon_RRN7
A2L_zn_ribbon
Zn_ribbon_tTFIIB
Zn_ribbon_LysW
HTH_Tnp_ISL3
Anti-TRAP
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AUV81058
UniProt:
A0A2I8VGK8
LinkDB
All DBs
Position
complement(993730..994719)
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AA seq
329 aa
AA seq
DB search
MSEKTYGRTRLRDAPRERDERTNETETTGDELTCPECSGNVVTDDEHGETVCSECGLVIT
ADSVDRGPEWRAFDSREKDQKSRVGAPTTNTMHDKGLSTNIDWRDRDAYGNSLGARQRQK
MQRLRKWNERFRTRDSKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALGEDLLPG
RSIEGVSTACTYAAARMAGVPRSLDEIAEVSRVEKSEVARTYRYVSRELSLEVKPADPEQ
YVPRFASELDLSDESKMRARQLLQNAKEQGVHSGKSPVGLAAAAVYAASLLTNEKTTQAA
VSEVADISEVTIRNRYHELLEAEEQVGLA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaaacatacggacgaacacgactgcgagacgcaccgcgcgaacgggacgaa
cgaacgaacgaaaccgaaaccaccggagacgaactgacctgccccgagtgttcgggcaac
gtcgtcaccgacgacgagcacggcgagaccgtctgctcggagtgtgggctcgtcatcacc
gccgactcggtggaccgcggccccgagtggcgcgcgttcgactcccgcgagaaggaccag
aagtcccgcgtcggtgcgccgacgacgaacacgatgcacgacaaggggctgtcgacgaac
atcgactggcgcgacagggacgcgtacggcaactcgctcggtgcgcgccagcgccagaag
atgcagcgcctccgcaagtggaacgagcgcttccgcacccgcgactcgaaggagcgaaac
ctcaagcaggcgctcggcgaaatcgaccgcatggcctcggcgctgggcctcccggacaac
gttcgggagaccgcgtcggtcatctaccgccgcgctctgggtgaagacctccttcccggg
cgctccatcgaaggcgtctccaccgcgtgcacgtacgccgccgcgcgaatggccggcgtc
ccccggtcgctggacgagattgcagaggtctcccgcgtcgagaagagcgaagtcgcccgc
acctaccgctacgtctcccgggaactctccctcgaagtgaagcccgccgaccccgagcag
tacgttccgcggttcgcgagcgaactcgacctctcggacgagtcgaagatgcgcgcccgt
cagcttctgcagaacgcgaaggaacagggcgtccactcggggaagtcccccgtagggctg
gccgcggccgcggtgtacgccgcctccctcctcaccaacgagaagacgacgcaggccgcc
gtcagcgaggtggccgacatctccgaggtgacgattcggaaccgctaccacgaactgctc
gaagccgaagagcaggtcggcctggcctga
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