Salinigranum rubrum: C2R22_14960
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Entry
C2R22_14960 CDS
T05289
Name
(GenBank) PAS sensor protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
srub
Salinigranum rubrum
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srub03000
]
C2R22_14960
Transcription factors [BR:
srub03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2R22_14960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
BAT
GAF
GAF_2
PAS_8
HTH_10
PAS_3
GAF_3
PAS_7
PAS_10
Sigma70_r4_2
PAS_13
PAS_11
Motif
Other DBs
NCBI-ProteinID:
AUV82782
UniProt:
A0A2I8VLH4
LinkDB
All DBs
Position
3047171..3050710
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AA seq
1179 aa
AA seq
DB search
MGERGGRTALRDPRDRLVGHDRRALVTEVIAPAVRDGERVTREMLDDGDAGSTRLAFQLR
HGPNREGRWLEHRSEPIEDGPLAGGHVELYYGIADGRESESTAERDDQFERLVDAVEEYA
IFRLDENGHVESWNHGAERIKGYQATEIVGEHFSTFYTRDDRAADIPDRNLRAAADHGSF
ESEGWRVREDGSRFWASVTISAVYDDSGDVKGFVKVTRDMTDRRERERQYRRERDLLQQI
LDTAPVGIGVFDERGEAVRINDRFTELLGREASDPEPYRLGQQPLLGADGDVIPFDDRPA
ARALATGESVIDRRVRVDGNDDRTRWLSVNATPFGDEPGRVVVTIADVTRLKEQAERLER
QRDDIESELRVVFDRIDDAFFALDGSWQFTHVNGRAADLLSRSSAELVGRSVWDVFPEAR
GTTFQEEYEEAMETQETTSFEEYFEPLNTWFEVSAYPSESGLSVYFRDVTDRKQREQELE
LYETVVETVDDGIYAVDSDAEFVMVNDGFCELTGYDRDELLGRHATAIHDGDVTGRAEAM
VDEILDERRSVATIELDIHRKDGGSVPCESRLAPFELNGEYGRCGVVRDVSARLEQEREL
ETRVRQQEVVTGLGQKALEDRDLDALMREATALVSSTLENDSCAVLELDVDAEALSVRQG
VGWQSGVVGAATVSAVGGESQASYTLQSRDPVVVENLETETRFDGSGLLTEHGVRSGISV
VIGPWDDPWGVLSTHDSVERSFARTDVDFVQSVANVLASAIDRHAHETRLVRQREQLRAL
NDVNRVVNDITVAVIEQSTRAEIEETVCERLAGTESYCFAWVGEVDVASEDVCMRTEAGV
ENYLAEIDLSIDPDGPGGTGPTARAFQTGEIQTVQDVATDPEYEQWRDHAERYGYRSSAA
VPISHDGTLYGVLNVYAERPYAFEGEERSVLRQLGRVVGHAIAAMERKHALMSDELVQLQ
FRIPEIFEALDIGDAVTGTITFDQTVPLSESEYVVYGHATPDAVEGVRSIVDTIPHWIAV
TFRDEDEGADRIPFELRLSEPPVLSAVAAAGGSVESARIEDGDYEMTVHLSPTADAKRII
DLVRAEYPAVSLLKRTQVTRTDESSARMRRELAEALTDRQRTTLEMAYYAGFFEWPRHVS
GKEMAETMSVSPPTFHQHLRKAERKVFDSLFSHAAENAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaacgaggcggccggacagcacttcgggacccccgcgaccggttggtcggccac
gacaggcgcgcgctcgtcaccgaggtcatcgccccggccgtccgagacggtgagcgcgtc
acgcgtgagatgctcgacgacggcgacgcgggctccactcgactcgcgtttcagctacgg
cacggaccgaaccgggagggccggtggctcgaacaccggagcgaacccatcgaagacggc
cccctcgccggcggccacgtggaactctactacggcatcgcggacgggcgggagtcggaa
tcgaccgccgagcgggacgaccagttcgagcgactggtcgacgccgtcgaggagtacgcc
atcttcagactcgacgagaacggacacgtcgagagctggaaccacggtgccgagcggatc
aaggggtaccaggccaccgaaatcgtcggggaacacttctcgacgttctacacccgagac
gaccgcgcggccgacatccccgaccgaaacctccgcgcggccgccgaccacggctcgttc
gagtcggaggggtggcgcgtccgcgaggacggctcgcgcttttgggccagcgtgaccatc
tccgccgtgtacgacgacagcggcgacgtcaaggggttcgtgaaggtgactcgtgacatg
accgatcggcgggagcgcgaacgacagtaccggcgagagcgggacctgctacagcagatt
ctcgacacggctcccgtcggaatcggcgtcttcgacgagcggggcgaagcggtccggata
aacgaccgattcacggaactgctcgggagagaagcgagcgaccccgagccgtaccggctg
ggccaacagccgctcctgggtgcggacggcgacgtgatcccgttcgacgaccgaccggcc
gcccgagcgctggcgaccggagagtcggtcatcgaccgtcgcgtacgggtcgacgggaac
gacgaccggacgagatggctgtcggtcaacgcgaccccgttcggggacgaacccggcagg
gtcgtcgtgacgatcgcggacgtgacacggctgaaggaacaggcggagcggctcgaacga
cagcgcgacgacatcgagagcgaactccgcgtcgtgttcgaccggatcgacgacgcgttc
ttcgcgctcgacgggagctggcagttcacccacgtcaacggccgcgcagcggacctgctg
agccggtcgagcgccgaactcgtcggtcggagcgtgtgggacgtgttcccggaagcgcgc
ggaaccaccttccaagaggagtacgaggaggcgatggagacccaggagacgaccagtttc
gaggagtacttcgaaccgctgaacacgtggttcgaggtgtcggcgtacccctccgagagc
gggctgtcggtgtacttccgggacgtcaccgaccgcaaacagcgcgaacaggagttggaa
ctgtacgagaccgtcgtcgagacggtcgacgacggaatctacgccgtcgacagcgacgcc
gagttcgtcatggtcaacgacgggttctgcgaactcaccggctacgaccgcgacgaactc
ctgggtcggcacgcgacggcgattcacgacggcgacgtcacaggccgtgcggaggccatg
gtcgacgagatactcgacgagaggcgaagcgtcgcgacgatcgaactcgacatccaccgg
aaggacgggggctcggtcccgtgtgagagccggctcgcgccgttcgagctgaacggcgag
tacggtcggtgcggggtggttcgcgacgtctcggcccgtctcgaacaggagcgggaactc
gaaacgcgcgtccgacagcaggaagtcgtcacgggcctcggtcagaaggccctcgaggac
cgagacctcgacgcgctcatgcgcgaagccacggctctcgtgtcgagcacgctcgagaac
gactcctgtgcggtactggaactcgacgttgacgccgaagcgttgtcggtgcgacagggc
gtcggctggcagagcggtgtcgtcggcgcggcgaccgtctcggcggtcggaggcgagtcg
caggcttcgtacacgctccagtcgcgcgaccccgtcgtcgtcgaaaacctcgagacggag
acccgattcgacggatcgggcctgttgaccgagcacggggtgcgaagcggcatcagcgtc
gtcatcggcccgtgggacgacccgtggggggttctcagcacccacgacagcgtcgagcgg
tccttcgcccgcacggacgtcgacttcgtccagtcggtcgcgaacgtcctcgcctccgcg
atcgaccgtcacgcgcacgagacgaggctggtccgccagcgcgaacagctcagggcgctc
aacgacgtcaaccgggtcgtcaacgacatcaccgtcgcggtcatcgagcagtccacccgc
gcggagatcgaagagacggtctgcgaacgactcgcggggacggagtcgtactgcttcgcg
tgggtcggcgaggtcgacgtcgcctcggaggacgtgtgcatgcggacggaggccggcgtc
gagaactacctggcggagatcgacctgtctatcgaccccgacgggccgggggggacaggt
ccgaccgcacgggcgtttcagaccggcgagatacagaccgtccaggacgtggcgaccgac
cccgagtacgagcagtggcgtgaccacgccgagcggtacggctaccggtcgtcggccgca
gtcccgatcagtcacgacgggacgctgtacggggtcctcaacgtctacgccgagcggccg
tacgcgttcgagggggaggagcggtcggtcctcaggcaactcggtcgggtggtgggccac
gccatcgccgccatggagcgtaagcacgcgctgatgagcgacgaactcgtccagctccag
ttccgtatcccggagatattcgaggcgctggacatcggcgacgcggtcaccgggacgatc
acgttcgaccagacagtgccgctctccgagagcgagtacgtcgtctacggtcacgcgacg
cccgacgccgtcgagggtgtccggagcatcgtcgacacgattccccactggatagccgtg
acgttccgtgacgaggacgagggggcagaccgtatcccgttcgaactgagactctccgaa
ccgccggtgctgtcggcggtcgcggctgccggcggctccgtcgaatccgcgcgcatcgag
gacggcgactacgagatgacagtccacctgtcgccgaccgcggacgcgaagcgaatcatc
gacctcgtccgagcggagtatccggcggtcagcctgctcaaacgaacccaggtcacgcgg
acggacgaatcgtccgcacgtatgcggagagaactggccgaggcgctcaccgaccgacag
cgaacgacgctcgagatggcgtactacgccggcttcttcgagtggcctcggcacgtctcc
ggcaaggagatggccgagacgatgagcgtctccccgccgacgttccaccagcacctgcgg
aaagccgaacggaaggtgttcgactcgctgttctcacacgcggctgagaacgccgggtga
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