Salinigranum rubrum: C2R22_20230
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Entry
C2R22_20230 CDS
T05289
Name
(GenBank) Hef nuclease
Organism
srub
Salinigranum rubrum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
Cas3-like_C_2
5_3_exonuc
HHH_8
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AUV83684
UniProt:
A0A2I8VP78
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Position
complement(4093240..4095855)
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AA seq
871 aa
AA seq
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MAATSEDAYVDHPLLSPSFIEQRRYQLSLASAAMDEHTLVCLPTGLGKTTVSLLVTAERL
HELGGRSLMLAPTKPLVQQHADFYREALSIPDDDIVVFTGEVRPDDRAALWEDARIVIAT
PQVVENDLIGNRISLDGVTHLTFDECHRATGDYSYVYIAERYLADASHPLVTGMSASPGG
DKEAILQVCENLGLSNVEVMTDEDADVADYTHDTEVEWKRIELPDQVLEIRDLLNDVISD
RLEKLKELGVTRKTSPDLSQKELNGMRAELQKLINAGKSEGYQGMSIHAEVMKLRRAVEL
VETQSVESVRRYFERQRNAARSSGASKASQRLVSEPKVRKAMREAESYDGIHPKFSQTRI
LLAETLGIGGGERVIVFTESRDTAEALVDFLAESFHVRKFVGQSDTDGSEGMSQKEQQET
LDDFRAGEFEVLVSTSVAEEGLDVPEVDLVLFFEPVPTAIRSIQRKGRTGRQAEGRVVVL
LAEDTRDEAFFWISRRREREMEDELRDLKGVADELERELAETTLEAFEGEGQSSGGGHGH
GDADGDGNAEDDGDADATPTATQASAEQSTPAANGGSARDSSLTDFASSAGEHDGAGETD
ADAGPGATGDDSAADDAQEGTVATADSEGEDVVELVVDQRELDSTIARDLSTREGIRTRL
ETLAVGDYVCSDRVVVERKTVSDFLDTLTGKDRSLFGQARDMSRHYARPVVIIEGDGLYE
ERNIHPSAIRGAIASLAVDFGVSVLHTRDETDTTELLATLASREQTERDRTVSVHGEKAA
KTLDEQQEYVVGAIADVGPVTAQSLLAHFGSVEAVMTASEEELQEVRGVGAKTAERIREV
IGSDYAYDESGDEDGADGDDENDPSAESGTD
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgtccgaggacgcgtacgtcgaccacccgctgctctccccgtcgttcatc
gaacagcgccggtaccagctcagcctcgcgagcgccgcgatggacgagcacacgctcgtc
tgtctccccaccggactgggcaagacgaccgtctcgctcctggtgacggccgaacgcctc
cacgaactcggcgggaggtcgctgatgctcgcgccgacgaagccgctcgtccaacagcac
gccgacttctaccgcgaggcgctctcgattcccgacgacgacatcgtcgtcttcaccggc
gaggtccgccccgacgaccgcgccgccctctgggaggacgcccgaatcgtcatcgccacc
ccacaggtggtcgagaacgacctcatcggcaaccgcatctcgctcgacggggtgacacat
ctcaccttcgacgagtgccaccgcgcgaccggcgactactcgtatgtctacatcgccgag
cgctacctcgcggacgcctcccaccccctggtgacggggatgtccgcgtctccaggcggc
gacaaggaggccatcctccaggtgtgtgagaacctcggcctctcgaacgtcgaggtgatg
accgacgaggacgcggacgtcgccgactacacccacgacaccgaggtggagtggaaacgg
atcgaactccccgatcaggtgctcgaaatccgcgacctgctcaacgacgtcatctccgac
cgcctggagaaactgaaggaactgggcgtgacgaggaagacgtcgccggacctctcccag
aaggaactcaacgggatgcgcgccgagttgcagaagctcatcaacgccgggaagtccgag
ggctaccaggggatgtccatccacgcggaggtgatgaagctccgccgagcggtcgaactc
gtcgagacccagtccgtggaatcggtacggagatacttcgagcgccagcgcaacgccgcc
cgctcctccggcgcgtcgaaggcgagccagcgactcgtctccgagccgaaggtgcgaaag
gcgatgcgcgaggcggagtcgtacgacggcatccacccgaagttctcccaaacgcgcatc
ctcctcgcggagacgctgggaatcggcggcggcgagcgcgtcatcgtcttcaccgaatcg
cgcgacacggccgaggcgctcgtcgacttcctcgccgagtcgttccacgtgcggaagttc
gtcggccaatcggacacggacggctcggaggggatgagtcagaaagaacagcaggagacg
ctcgacgactttcgcgccggcgagttcgaggtgctcgtctccacctcggtcgcggaggag
ggcctcgacgtgcccgaagtcgacctcgtgctctttttcgaacccgtcccgacggccatc
cgctccatccagcgcaagggccggaccggacggcaggccgaagggcgcgtcgtcgtcctc
ctcgccgaggacacgcgcgacgaggcgttcttctggatctctcggcgacgagagcgggag
atggaagacgaactccgcgacctgaagggcgtcgccgacgaactcgaacgcgaactggcg
gagacgacgctcgaagcgttcgaaggggagggccagagcagcggaggcggacacggacac
ggcgatgcggacggcgacgggaacgccgaggacgacggagacgccgacgcgacgccgacc
gccacacaggcgtcggccgagcagtcgacgccggccgccaacggcgggagcgcccgcgac
tcgtcgctcaccgacttcgcgtcgtcggccggggagcacgacggtgccggagagacggac
gctgacgcgggtccgggcgccacgggcgacgactccgccgccgatgacgctcaggagggc
accgtcgcaaccgccgactccgagggcgaggacgtcgtcgaactcgtcgtcgaccagcgc
gaactcgactcgaccatcgcccgcgacctctccacgcgcgaggggattcgaacgcggctg
gagacgctcgccgtcggcgactacgtctgctcggaccgcgtcgtcgtcgagcgcaagacc
gtctcggacttcctcgacacgctcactgggaaggaccgctcgctgttcgggcaggcgcgg
gacatgtcccgacactacgcccgtccggtggtgatcatcgagggcgacggactgtacgag
gagcggaacatccacccgagcgccattcggggggccatcgcctcgctcgcggtggacttc
ggcgtgagcgtcctgcacaccagagacgagacggacacgacggaactgctcgccaccctc
gcctcccgcgaacagaccgagcgcgaccggaccgtgagcgtccacggcgagaaggcggcg
aagacgctcgacgagcagcaggagtacgtcgtcggcgccatcgcggacgtcggccccgtc
acggcccagtcgctgctcgcacacttcgggagcgtcgaggccgtgatgacggcgagcgaa
gaggagttacaggaggttcgcggcgtcggtgcaaagaccgccgagcggatacgcgaggtt
atcgggagcgactacgcgtacgacgagagcggggacgaggacggagccgacggggacgac
gagaacgacccgtcggccgagagcggcacggactag
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