Salinigranum rubrum: C2R22_20815
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Entry
C2R22_20815 CDS
T05289
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
srub
Salinigranum rubrum
Pathway
srub03022
Basal transcription factors
srub03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
C2R22_20815
09124 Replication and repair
03420 Nucleotide excision repair
C2R22_20815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srub03021
]
C2R22_20815
03036 Chromosome and associated proteins [BR:
srub03036
]
C2R22_20815
03400 DNA repair and recombination proteins [BR:
srub03400
]
C2R22_20815
Enzymes [BR:
srub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
C2R22_20815
Transcription machinery [BR:
srub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
C2R22_20815
Chromosome and associated proteins [BR:
srub03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
C2R22_20815
DNA repair and recombination proteins [BR:
srub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
C2R22_20815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ATPase
AAA_16
nSTAND3
ResIII
SLFN-g3_helicase
Zot
AAA_25
AAA_34
DUF815
AAA_22
PhoH
AAA_19
DUF883
TrwB_AAD_bind
AAA_11
IstB_IS21
Lipase3_N
Motif
Other DBs
NCBI-ProteinID:
AUV84081
UniProt:
A0A2I8VQ82
LinkDB
All DBs
Position
4209691..4211793
Genome browser
AA seq
700 aa
AA seq
DB search
MSRIAEALDEERNVLLEGAPGTGKTLSALVPALEHARETDKTVVITTNVHQQMRQFVADA
RAITRTEPIRAVVFKGKASMCHIDVDYRECQTLRDTTRDLVEKREEMEELRDRADTLLDD
MREGGQGAGDAYQAVTDELDALESEVEGFESTNVCDHYRANLTRDTGAFFSWLFDDVRTP
EDVYDYADREGLCGYELLKEGMEGVDLVVCNYHHLLDPLIREQFFRWLGREPEDVITVFD
EAHNVESAARDHATRTLTENTLASALTELEDVDDSRAAAAENVLRAFHDALCETYDGALA
FGEREQVGENWYDLSVSNPDRRDDLTLSFLDRYEGRGISTEVELALQLGESLDEEYEEQY
KRGETTSRKECQTLQAAAFVATWMDEGGELGQHPMCSVRRDSGTDELYGRAELYTCIPRE
VTKELFDEVSATVLMSATLRPFDVTQDVLGLDDPETMAYGLAYPEANRRTLAVDVPPLFS
SERSNPETQAVVADTLRDVLRFTPGNTLCFFPSYAEAERYYERLRGTGVGTDLWLDGSDV
DTEAARKEFVAGDDGALFTSLWGTLSEGVSFDADDARTVAVVGVPYPHLSERMEAVQDAY
DRAYPGKEAGWRYGVEIPTIRKTRQALGRVIRSPDDFGVRLLLDRRYTRESRDMGRYGVR
GSFPTEERTEFVDVAPEKAKFAMLNFFTDHDAYAGDPPRP
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcatcgccgaggcgctcgacgaggagcggaacgtcctcttagagggcgcgccg
gggacgggcaagacgctctcggcgctcgtgccggcgctcgaacacgcccgggagacggac
aagacggtcgtcatcacgacgaacgtccaccaacagatgcgccagttcgtcgccgacgcc
cgcgccatcacccgaacggagcccatccgcgccgtggtgttcaaggggaaagcgtcgatg
tgccatatagacgtagattaccgcgagtgtcagaccctccgcgacacgacgcgcgacctg
gtcgagaaacgtgaggagatggaggaactccgtgaccgtgccgacacgctcctcgacgac
atgcgcgaggggggccagggcgcgggtgacgcgtaccaggcggtgaccgacgaactcgac
gcgctcgaatccgaagtagaagggttcgagtcgaccaacgtctgcgaccactaccgggcg
aacctcacccgcgacaccggcgcgttcttctcgtggctgttcgacgacgttcgaaccccc
gaagacgtgtacgactacgcggaccgggaggggctgtgcgggtacgaactgctgaaagag
ggaatggagggcgtcgacctcgtcgtctgcaactaccaccacctgctcgacccgctgatt
cgagagcagttcttccggtggctcggccgcgagcccgaggacgtgatcacggtgttcgac
gaggcgcacaacgtcgagtcggccgccagggaccacgcgacgcggacgctgacggagaac
acgctcgcctccgcgctcaccgagttagaggacgtcgacgactcgcgggcggcggcggcg
gagaacgtcctccgcgcctttcacgacgcgctctgtgagacgtacgacggggcgctggcg
ttcggcgagcgcgagcaggtcggcgagaactggtacgacctctcggtctcgaaccccgac
cgccgcgacgacctcacgctctcgttcctcgaccggtacgagggccgcggcatctcgacg
gaggtcgaactcgcactccaactcggcgagagtctggacgaggagtacgaagagcagtac
aagcgcggggagaccacctcgcgcaaggagtgtcagacgctgcaggcggcggcgttcgtc
gccacgtggatggacgagggcggcgaactgggccagcacccgatgtgctcggttcggcgc
gacagcggcaccgacgaactgtacggccgggcggagctgtacacgtgcatcccgcgggag
gtgacgaaggaactgttcgacgaggtgtcggcgacggtgctgatgagcgcgacgctccgc
cccttcgacgtgacgcaggacgtgctgggactggacgacccggagacaatggcgtacggc
ctcgcctacccggaagcgaaccgccggacgctcgccgtcgacgtgccgccgcttttcagt
tccgagcggagcaaccccgagacgcaggcggtggtcgcggacacgctgcgggacgtcctt
cggttcacgccggggaacacgctctgtttcttcccctcgtacgccgaggcggagcgatac
tacgagcggttacggggaacgggagtcgggacggacctgtggctcgacggctccgacgtc
gacaccgaggcggctcgaaaggagttcgtcgcgggcgacgacggcgcgctgttcacctcg
ctgtgggggacgctgagcgagggcgtgagcttcgacgcggacgacgcgcggacggtcgcc
gtcgtcggcgttccctacccgcatctctccgagcggatggaggcggtccaggacgcgtac
gaccgggcgtacccggggaaagaggcggggtggcgctacggcgtcgagattccgaccatc
cggaagacgcggcaggcgctcgggcgagtcatccgctcgccggacgacttcggggttcga
ctcctgctggaccgccggtacacgcgggagagccgcgacatggggcggtacggcgtccgc
ggctcgtttccgacggaggagcggacggagttcgtcgacgtcgcccccgagaaggcgaag
ttcgcgatgctgaacttcttcaccgaccacgacgcgtacgcgggcgacccgccgcggccc
tga
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