Streptomyces rutgersensis: F0345_06025
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Entry
F0345_06025 CDS
T08623
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03030
DNA replication
srug03430
Mismatch repair
srug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0345_06025 (dnaE)
03430 Mismatch repair
F0345_06025 (dnaE)
03440 Homologous recombination
F0345_06025 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srug03032
]
F0345_06025 (dnaE)
03400 DNA repair and recombination proteins [BR:
srug03400
]
F0345_06025 (dnaE)
Enzymes [BR:
srug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0345_06025 (dnaE)
DNA replication proteins [BR:
srug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0345_06025 (dnaE)
DNA repair and recombination proteins [BR:
srug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0345_06025 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
QNE80733
UniProt:
A0ABX6RKM6
LinkDB
All DBs
Position
complement(1481721..1485269)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSATSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSA
QKAGVIPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAADSTGLHNL
FRLSSDAYSEGWLQKWPRMDKESISQWSQGLIASTGCPSGEVQTRLRLGQEEEALRAAAE
YQEIFGKDRYFLELMDHGIEIERRVRQGLLDIGKKLGIPPLVTNDSHYTYSHESVAHDAL
LCIQTGKNLSDPDRFRFDGTGYYLKSTEEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFE
KRDLMPRFDIPDGFTEVTWFQEEVRRGMARRFPAGVPEDRQRQAEYEMDVIIQMGFPGYF
LVVADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERVSMPD
VDIDFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTK
AMPADVLGKGIDLDGITNPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVH
AAGVIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDARKM
VEANKGIDLDLLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVS
ALYRPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEVLGLTYGLIVYQEQVQKAAQI
VAGYSLGEADILRRVMGKKKPEELEKNFVLFQAGARKNGFSDEAIQALWDVLVPFAGYAF
NKAHSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPDV
NESVHNFAAQSDDVILFGLEAVRNVGTNVVESIIRARKAKGKFSSFPDYLDKIEAQACNK
RTTESLIKAGAFDALGHTRKGLTAHYEPMIDNVVQVKRKEAEGQFDLFGGMGDESADEPG
FGLDVEFTEEEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFGDG
AVVTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVK
GRLDKREDIPRLVAMELQVPDLSNAGTNAPVIITIPAVKVTPPMVSRLGEVLDSHRGNSE
VRIKLQGPRKTTVLRLDRHRVQPDPSLFGDLKVLLGASCLAG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgccacgtccaagccgcccttcacgcacctgcacgtccacacccagtactcgctg
ctggacggtgccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgacg
cacatcgccatgtccgaccacggcaacctccacggcgcctacgacttcttccacagcgcc
cagaaggccggggtcatcccgatcatcggcatcgaggcgtacgtggcgcccgagtcgcgg
cggaccaagcggaagatccagtggggccagccgcaccagaagcgggacgacgtctcgggt
tccggtggttacacccacaagacgatctgggcggccgactccaccggtctgcacaacctc
ttcaggctctcctccgacgcgtactccgagggctggctccagaagtggccccggatggac
aaggagtcgatctcgcagtggtcgcaggggctgatcgcctccaccggctgcccctccggc
gaggtgcagacccggctgcggctggggcaggaggaggaggcgctgcgggccgccgccgag
taccaggagatcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgag
atcgagcgccgggtccgccagggcctgctggacatcggcaagaagctcggcatccccccg
ctggtcaccaacgactcgcactacacgtactcccacgagtcggtcgcccacgacgccctg
ctctgcatccagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcacg
ggctactacctgaagtcgacggaggagatgtacgccatcgactcctccgacgcctggcag
gaggggtgccgcaacacgctgctggtcgccgagcagatcgacaccaccggcatgttcgag
aagcgcgacctgatgccgaggttcgacatcccggacggcttcaccgaggtcacctggttc
caggaggaggtccgtcgcggcatggcgcgccgcttcccggccggcgtccccgaggaccgc
cagcggcaggccgagtacgagatggacgtcatcatccagatggggttcccggggtacttc
ctcgtcgtcgccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggc
cgaggctccgccgcaggttcgatcgtcgcgtacgccatgggcatcaccgacctcgacccg
atcgagcacggcctgatcttcgagcgcttcctcaacccggagcgcgtctccatgcccgac
gtcgacatcgacttcgacgagcgcaggcgcgtcgaggtcatccggtacgtcacggagaag
tacggcgccgacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgcc
atcaaggactcggcccgcgtcctcgggtacccgtacgcgatgggcgaccggctcaccaag
gcgatgcccgccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccgaag
cacccgcgctacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtg
aagaaggtcatcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcac
gcggccggcgtgatcatgtccagcgagccgatcgtcgaccacgccccgctgtggacccgg
cacaccgacggcgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctg
ctgaagatggacttcctcggcctgcgcaacctcaccatcatggacgacgcgcggaagatg
gtggaggccaacaagggcatcgacctcgacctgctcgccctgccgctggacgacccgaag
accttcgaactcctctgccgcggtgacaccctgggcgtcttccagttcgacggcggaccc
atgcggtccctgctgcggctgatgaagcccgacaacttcgaggacatttccgccgtctcg
gccctgtaccggccgggcccgatgggcatgaactcgcacaccaactacgccctgcgcaag
aacggccagcaggagatcaccccgatccacccggagctggaggagcctctcaaggaggtc
ctggggctcacctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatc
gtcgccgggtactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaag
cccgaggagctggagaagaacttcgtcctcttccaggccggcgcccgcaagaacggcttc
tccgacgaggcgatccaggccctctgggacgtgctggtgcccttcgccggctacgccttc
aacaaggcgcactcctccgcgtacggcctggtcacctactggaccgcctacctcaaggcc
aactacccggccgagtacatggcggcgctgctcacctcggtcaaggacgacaaggacaag
tcggccgtctacctgaacgagtgccggcgcatgaagatcaaggtgctgccgccggacgtc
aacgagtcggtgcacaacttcgccgcccagagcgacgacgtgatcctcttcggcctcgaa
gcggtccgcaacgtcggcaccaacgtggtcgagtcgatcatccgcgcccgcaaggcgaag
gggaagttctcctccttccccgactacctcgacaagatcgaggcccaggcgtgcaacaag
cggaccaccgagtcgctgatcaaggccggcgccttcgacgcgctcggccacacccgcaag
ggcctcaccgcgcactacgagccgatgatcgacaacgtggtccaggtcaagcgcaaggag
gccgaggggcagttcgacctcttcggcggcatgggtgacgagagcgccgacgaacccggt
ttcgggctcgacgtcgagttcaccgaagaggagtgggacaagacctacctcctcgcccag
gagcgcgagatgctcggcctctacgtctccgaccacccgctcttcggcctggagcacgtc
ctctccgacaaggccgacgccgggatcgggcagctcaccggcggcgacttcggggacggc
gcggtcgtcacggtcggcggcatcatctccggcctccagcgcaagatgaccaagcagggc
aacgcctgggccatcgccaccgtcgaggacctcgccggttccatcgagtgcatgttcttc
cccgccacctaccagctcgtctccacccaactcgtcgaggacgccgtcgtcttcgtcaag
gggcggctggacaagcgggaggacatcccgcggctggtcgcgatggagctccaggtcccc
gacctgtccaacgcgggcaccaacgccccggtgatcatcaccatccccgccgtcaaggtg
accccgccgatggtcagccgcctcggcgaggtgctcgactcccaccgcggcaactccgag
gtgcggatcaagctccagggtccgcgcaagaccaccgtcctccggctcgaccggcaccgg
gtccagcccgacccctcgctcttcggtgacctgaaggtgctcctcggcgcctcctgcctg
gccggctga
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