Streptomyces rutgersensis: F0345_08060
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Entry
F0345_08060 CDS
T08623
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03030
DNA replication
srug03430
Mismatch repair
srug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0345_08060 (holA)
03430 Mismatch repair
F0345_08060 (holA)
03440 Homologous recombination
F0345_08060 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srug03032
]
F0345_08060 (holA)
03400 DNA repair and recombination proteins [BR:
srug03400
]
F0345_08060 (holA)
Enzymes [BR:
srug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0345_08060 (holA)
DNA replication proteins [BR:
srug03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0345_08060 (holA)
DNA repair and recombination proteins [BR:
srug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0345_08060 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QNE81079
LinkDB
All DBs
Position
complement(1949845..1950834)
Genome browser
AA seq
329 aa
AA seq
DB search
MPRKTANDDPLAPLTLAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTSDQLQPGTLAE
LTSPSLFAERKVVVVRDTQDLSADSVKDVKAYLGSPVEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRSEFRALGRSATPEASQTLVDAIGSDLRELASAVTQLA
ADVEGNIDEAVVGRYYTGRAEASSFTVADRAVEGRTAEALEALRWSLSTGVAPVLLTSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWSPDGVATALRAVAAADAG
VKGGGDDPEYALEKAVVAVATAARSRQGR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaagactgccaacgacgatccgctcgccccgctcaccctcgccgtgggccag
gaggatctgctcctcgaccgcgccgtgcagcaggtggtggccgccgcccgcgccgccgac
gcggacaccgacgtgcgcgacctcacctcggaccagctccagcccggcaccctcgccgaa
ctgaccagtccctcactcttcgccgagcgcaaggtcgtggtggtgcgcgacacccaggac
ctgtcggcggactcggtcaaggacgtcaaggcgtacctcgggtcacccgtcgaggagatc
accctcgtcctgctgcacgccgggggcgccaaggggaagggactgctcgacgcggcccgc
aaggcgggggcccgcgaggtggcctgcccgaagatgaccaagcccgccgaccggctggcg
ttcgtcaggagcgagttccgggcgctggggcggtccgcgacccccgaggcgtcgcagacg
ctggtcgacgccatcggcagcgacctgcgggagctggcgagcgcggtcacgcaactcgcc
gcggacgtcgaggggaacatcgacgaagcggtggtcgggcggtactacacggggcgtgcg
gaggcgtcgagcttcaccgtggccgaccgggccgtggagggccggacggcggaggcgctg
gaggcgttgcgctggtcgctgtcgaccggggtggcgcccgtgctcctcaccagcgcgctg
gcgcagggggtgcgggcgatcgggaagctctcctcggcgcgcgggggacggcccgccgac
ctcgcccgggagctggggatgccgccctggaagatcgaccgggtccggcagcagatgcgg
ggctggagccccgacggggtcgccaccgcactgcgggccgtcgccgcggccgacgcgggc
gtcaagggcggcggggacgaccccgagtacgcgctggagaaggcggtcgtcgccgtcgcc
acggccgcccggagcaggcagggccgttag
DBGET
integrated database retrieval system
