Streptomyces rutgersensis: F0345_08815
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Entry
F0345_08815 CDS
T08623
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F0345_08815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srug03400
]
F0345_08815
Enzymes [BR:
srug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F0345_08815
DNA repair and recombination proteins [BR:
srug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0345_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
AAA_16
NAT10_TcmA_helicase
NPHP3_N
PIF1
HTH_IclR
AAA
nSTAND3
DEAD
P-loop_TraG
AAA_28
TrwB_AAD_bind
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QNE81194
UniProt:
A0ABX6RLN0
LinkDB
All DBs
Position
complement(2148945..2151203)
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AA seq
752 aa
AA seq
DB search
MASTSPHGPRPALAVLEAVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQPGE
SLRMEGRWGSHPQYGKQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGV
DTLDVIETDAKRLVEVPGLGPKRTRLIAAAWEEQKAIKEVMVFLQGVGVTTSIAVRIYKK
YGDASISVVRNQPYRLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSSDQG
HVYLPEDRLIADAVKLLQVDTGLVIDCLAELAEDEEGVVREKVPGPDGEPVTAVYLVPFH
RAELSLAAQLLRLLRAPDDRMPAFRHVDWEKALGWLAHRTGTELAPEQRDAVRLALTEKA
AVLTGGPGCGKSFTVRSVVELARAKGAKVVLAAPTGRAAKRLAELTGAEASTVHRLLELR
PGGDAAYDRDRPLDADLVVVDEASMLDVLLANKLVKAVAPGAHLLFVGDVDQLPSVGAGE
VLRDLLADGGPIPSVRLTRIFRQAQRSGVVTNAHRINAGTPPLTQGLDDFFLFVEDDTEE
VGRLTVDVAARRVPARFGLDPRRDIQVLAPMHRGPAGAGALNGLLQQAITPPRPDLPEKR
FGGRVFRVGDKVTQIRNNYEKGLNGVFNGTVGVVTALNAEEQRLTVLTDEDEEVPYDFDE
LDELAHAYAVTIHRSQGSEYPAVVVPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSRKAL
GQAVRTVSAGRRCTALDHRLLSGAPSRSFHQK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacttccccgcacgggccccgccccgccctcgccgtcctggaagccgtcctc
gaacggatcacctacgccaacgaggagaacggctacaccgtcgcccgggtcgacaccggc
cgcggtggcggggacctgctcaccgtggtcggggcgctgctcggggcgcagccgggggag
tcgctgcggatggaggggcggtgggggtcgcacccgcagtacggcaagcagttcaccgtg
gagaactacacgacggtgctccccgccaccgtgcagggcatccgccgctacctcggctcc
ggcctgatcaagggcatcggcccgcgcatcgccgaccgcatcaccgagcatttcggcgtc
gacaccctcgacgtcatcgagaccgacgcgaagcgcctggtcgaggtccccgggctcggc
cccaagcggaccaggctgatcgccgccgcctgggaggagcagaaggcgatcaaggaggtg
atggtcttcctccagggcgtcggtgtcaccacctccatcgcggtacgcatctacaagaag
tacggtgacgcctccatctccgtcgtccgcaaccagccctaccggctcgccgccgacgtc
tggggcatcggcttcctcaccgccgaccgcatcgcccaggccgtcggcatcccgcacgac
agcccggaccgcgtcaaggccggcctccagtacgccctctcccagtccagcgaccagggc
cacgtctacctccccgaggaccggctcatcgccgacgccgtcaaactcctccaggtcgac
accggcctggtcatcgactgcctcgccgaactcgccgaggacgaggagggcgtggtccgc
gagaaggtccccggacccgacggggaacccgtcaccgccgtctacctggtccccttccac
cgggccgaactctcgctcgccgcccagctgctgcgcctgctgcgcgccccggacgaccgg
atgcccgccttccgccacgtcgactgggagaaggcgctcgggtggctggcccaccgcacc
ggcaccgaactcgcccccgaacagcgggacgccgtccggctcgcgctcaccgagaaggcg
gccgtgctcaccggcgggcccggctgcggcaagtccttcaccgtccgctcggtggtcgaa
ctggcccgcgccaagggcgccaaggtggtcctcgccgcccccaccggccgcgccgccaag
cggctggccgaactgaccggcgccgaagcctccaccgtccaccgcctgctggaactgcgg
cccggcggggacgccgcgtacgaccgggaccggccgctcgacgccgacctcgtggtggtc
gacgaggcgtccatgctggacgtgctgctcgccaacaagctggtcaaggcggtcgcgccc
ggcgcccacctgctcttcgtcggcgacgtcgaccagctgcccagcgtcggcgccggcgag
gtgctgcgcgacctgctcgccgacggcggaccgatcccctccgtccggctgaccaggatc
ttccgccaggcccagcgctccggcgtcgtcaccaacgcccaccgcatcaacgcgggcacc
ccgccgctgacccaggggctcgacgacttcttcctcttcgtggaggacgacaccgaggag
gtcggccgcctcacggtcgacgtggccgcccgccgggtcccggcccgcttcggcctcgac
ccgcgccgcgacatccaggtcctcgcccccatgcaccgcggcccggccggcgcgggtgcc
ctgaacggcctcctccagcaggccatcaccccgccccggcccgaccttcccgagaagcgg
ttcggcggccgcgtctttcgcgtcggggacaaagtcacccagatccgtaacaattatgag
aaagggctcaacggcgtcttcaacggtaccgtcggggtcgtcaccgccctgaacgccgag
gagcagcggctgaccgtgctcaccgacgaggacgaggaggtcccgtacgacttcgacgag
ctggacgagctggcgcacgcctacgccgtgacgatccaccgttcgcagggcagcgagtac
ccggcggtggtggtgccggtgaccaccagcgcctggatgatgctccagcgcaacctgctc
tacaccgccgtcacccgggccaagaggctggtggtcctggtgggctcgcggaaggcgctc
ggccaggcggtgcgcacggtctccgcggggcgcaggtgcaccgcgctggaccaccggctg
ctctccggagcgccgagccggtcgttccatcagaaatga
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