Streptomyces rutgersensis: F0345_09010
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Entry
F0345_09010 CDS
T08623
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
F0345_09010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srug03019
]
F0345_09010
03009 Ribosome biogenesis [BR:
srug03009
]
F0345_09010
Messenger RNA biogenesis [BR:
srug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F0345_09010
Ribosome biogenesis [BR:
srug03009
]
Eukaryotic type
Pre-60S particles
RNases
F0345_09010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNE81225
UniProt:
A0ABX6RMB8
LinkDB
All DBs
Position
2199740..2200342
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AA seq
200 aa
AA seq
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MNDRMVWIDCEMTGLSLADDALIEVAALVTDSELNVLGDGVDIVIRPPDEALETMPEVVR
KMHTASGLLAELAGGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRNFLARDMAAL
EGYLHYRIVDVSSVKELARRWYPRAYFNSPDKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKAIAAKHVLTSE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatggtgtggatcgactgcgagatgaccgggctctcgctggcggacgac
gcactcatcgaggtggccgcgctggtcaccgactcggaactgaacgtgctcggcgacggt
gtggacatcgtgatccgtccgccggacgaggcgctggagaccatgcccgaggtggtgcgc
aagatgcacaccgcctcggggctcctcgccgaactggcgggcggcaccacgttggccgac
gcggaggcgcaagtcctcgcgtacgtccgcgagcacgtcaaggagcccggcaaggctccg
ctgtgcgggaactcggtcggcaccgaccggaacttcctcgcgcgggacatggcggcgctg
gaggggtatctccactaccgcatcgtggacgtctcctcggtgaaggaactggcccgccgg
tggtacccgcgggcgtacttcaacagtcccgacaagaacggcaaccaccgggcactcgcg
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggcggtcttcgtgccgcag
cccggacccgattccgacaccgcgaaggccatcgccgccaagcatgtgctgacctccgaa
taa
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