Streptomyces rutgersensis: F0345_11155
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Entry
F0345_11155 CDS
T08623
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F0345_11155 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srug03019
]
F0345_11155 (recQ)
03400 DNA repair and recombination proteins [BR:
srug03400
]
F0345_11155 (recQ)
Enzymes [BR:
srug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0345_11155 (recQ)
Messenger RNA biogenesis [BR:
srug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F0345_11155 (recQ)
DNA repair and recombination proteins [BR:
srug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0345_11155 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QNE84757
UniProt:
A0ABX6RVI6
LinkDB
All DBs
Position
complement(2668097..2670157)
Genome browser
AA seq
686 aa
AA seq
DB search
MASGITDGGTPAYGGPEDFPDDLFDGGPPPEDPFGDAPFPDEEFPEDGLREELSGAFPEG
VGETPVHDRRDALATLRSVFGYDAFRGDQEAVIDHLVGGGDAVVLMPTGGGKSLCYQIPA
LVRPGTGIVISPLIALMQDQVDALRAAGVRAGFINSTQDFEERRLTEAEFLSGELDLLYL
APERLRVDATLDLLSRGKVSLFAIDEAHCVAQWGHDFRPDYLTLSVLGERWPDVPRVALT
ATATGATHQEITRRLGLPDAKHFVASFDRPNIQYRIVPKNDPKKQLLTFLKEEHPGDAGI
VYCLSRNSVERTADFLRDHGVEAVPYHAGLDARTRATNQSRFLREDGLVVVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGRPSTAWMAYGLQDVVQQRKLIQSGEGDEA
FRRRAQSHLDAMLALCETAQCRRAQLLRYFGQEPTGEKCGNCDTCLTPPETWDGTVAAQK
AMSAVVRLKRERNQKFGTGQIIDILMGRKTAKVIQFDHDQLSVFGVGQELTEGEWRGAVR
QLLAQGLLAVEGEYGTLVLTDEAGEVLGGRREVRFRKEPKKAPAARSGRSGAAAGPGGKR
SKAVIDLPEESLPVFEALRAWRAAQAKEQGVPAYVIFHDATLREITVARPTTLDALGRLG
GIGDKKLQNYGPGVLATLAEQGIGEG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcatcacggacggcggcacacccgcgtacggcgggccggaggacttcccg
gacgacctcttcgacggcggccccccaccggaggaccccttcggcgacgcccccttcccg
gacgaggagttccccgaggacggcctccgcgaggagctgtccggcgccttccccgagggc
gtcggcgagaccccggtccacgaccgccgcgacgccctggccacgctccgctccgtcttc
gggtacgacgcgttccgcggtgaccaggaagccgtcatcgaccacctggtcggcggcggc
gacgcggtcgtcctcatgcccaccggtggcggcaagtccctctgctaccagatcccggcc
ctggtgcgcccgggcaccggcatcgtgatctccccgctgatcgccctcatgcaggaccag
gtcgacgcgctgcgcgccgccggggtgagggccggcttcatcaactccacccaggacttc
gaggagcgccgcctcaccgaggccgagttcctctccggcgaactggacctgctctacctc
gcccccgagcggctgcgcgtggacgccaccctcgacctgctctcccgcggcaaggtctcc
ttgttcgccatcgacgaggcgcactgcgtcgcccagtggggccacgacttccgccccgac
tacctcaccctctcggtgctcggcgagcgctggccggacgtcccccgggtcgccctcacc
gccaccgcgaccggggccacccaccaggagatcacccgccgactcggcctgcccgacgcc
aagcacttcgtcgccagcttcgaccggcccaacatccagtacaggatcgtcccgaagaac
gacccgaagaagcagctcctcaccttcctcaaggaggagcacccgggcgacgccggcatc
gtctactgcctctcgcgcaactccgtggagcgcaccgccgacttcctccgcgaccacggc
gtcgaggccgtgccgtaccacgcggggctcgacgcgcggacccgcgccaccaaccagtcc
cgcttcctgcgcgaggacggcctggtcgtcgtcgccaccatcgccttcggcatgggcatc
gacaagcccgacgtccgcttcgtcgcccacctcgacctgccgaagtccgtcgaggggtac
taccaggagacggggcgcgcgggccgcgacggccgcccctccacggcctggatggcgtac
ggcctccaggacgtggtgcagcagcgcaagctcatccagtccggcgagggcgacgaggcg
ttccggcgccgcgcgcagtcgcacctggacgcgatgctcgccctctgcgagaccgcccag
tgccgacgcgcccagctcctgcgctacttcggccaggagccgaccggcgagaagtgcggc
aactgcgacacctgcctgaccccgccggagacctgggacggcacggtcgccgcacagaag
gccatgtcggccgtggtccgcctcaagcgggagcggaaccagaagttcggcaccggtcag
atcatcgacatcctgatgggccgcaagaccgccaaggtcatccagttcgaccacgaccag
ctctccgtcttcggcgtcggccaggagctgaccgagggcgagtggcgcggggccgtgcgg
caactgctggcccagggactgctggccgtcgagggggagtacggcacgctggtcctcacc
gacgaggcgggcgaggtgctgggcggccgccgcgaggtccgcttccgcaaggagcccaag
aaggcaccggccgcccgctccggcaggtccggggcggccgctggtccgggcggcaagcgg
agcaaggcggtcatcgacctcccggaggagtccctcccggtcttcgaggccctccgcgcc
tggcgcgccgcccaggccaaggaacagggcgtcccggcctacgtcatcttccacgacgcc
accctgcgcgagatcaccgtcgcccgtcccaccaccctcgacgccctcggccggctcggc
ggcatcggcgacaagaagctccagaactacggacccggggtgctggccaccctggcggaa
caggggatcggggagggctga
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