Streptomyces rutgersensis: F0345_11420
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Entry
F0345_11420 CDS
T08623
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug00061
Fatty acid biosynthesis
srug00071
Fatty acid degradation
srug01100
Metabolic pathways
srug01212
Fatty acid metabolism
srug02024
Quorum sensing
srug04146
Peroxisome
Module
srug_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F0345_11420
00071 Fatty acid degradation
F0345_11420
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F0345_11420
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0345_11420
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srug01004
]
F0345_11420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srug04147
]
F0345_11420
Enzymes [BR:
srug01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F0345_11420
Lipid biosynthesis proteins [BR:
srug01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F0345_11420
Exosome [BR:
srug04147
]
Exosomal proteins
Exosomal proteins of breast milk
F0345_11420
Exosomal proteins of breast cancer cells
F0345_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
QNE81653
UniProt:
A0ABX6RLX1
LinkDB
All DBs
Position
complement(2727372..2729324)
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AA seq
650 aa
AA seq
DB search
MSAPTTPPAVPLARTTGEDGRPRLVEPELRRVDGAVREAAVPPFAAPAATGSLADIPFDN
AREAPDEAVLSRKDEDGRFQDLTAAEFAAEVLALAKGLAATGLEPGDRLAIMARTTYEWT
LLDFAAWAAGLVTVPVYPTSSAFQTRWILQNAGVKALAVESAEQAAALGPERDRLPDLAH
LWSFATSPKDPIGDLGRLKEAGGAIPDEEITRRRTALTPQTTATLIYTSGTTGRPKGCVL
THGNFFAEVDNAVELLHPVFKSVSREPASTLLFLPLSHVFGRMVAIGCLRARVRLGHAPS
IRTEDLLADLAAFRPTFLLAIPYVLEKVFNTGRATAEKMGRAASFDRAARIARAWGEATE
AQQHGTGPGPGLGLRTARALYDPLVYRRVRAALGGRVRYAICGGSPLGRRLAAFYAGAGI
EIFEGYGLTETTAAAVVTPPLKPRLGTVGWPLPGGRVRIADDGEVLLGGGHVFSGYWDAE
TGEVTRGPVDGWFPTGDLGALDEDGYLTITGRKKDILITTGGKNVAPAPLEDWLRAHPLV
GQCMVVGDDRPYITALLTLEPEGIAHWRRMRRKEALTAAELARDPELLEALQKAVDDANK
LVSRAESIRRFTVLPVDLTEEAGHLTPSLKIKRPAVEQAFAEEIEALYRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcccaccaccccgcccgccgtcccgctcgcccgcaccaccggggaggacggg
cggccccgcctggtcgaaccggagctgcgccgggtggacggcgcggtccgcgaggccgcc
gtcccgcccttcgcggcgcccgccgccaccggctcgctcgccgacatccccttcgacaac
gcccgcgaggcccccgacgaggcggtcctctcccgcaaggacgaggacggacgcttccag
gacctcaccgccgccgagttcgccgccgaggtgctcgccctcgccaagggcctcgccgcc
accggcctggaacccggcgaccggctcgccatcatggcccgcaccacctacgagtggacc
ctgctggacttcgccgcctgggccgccggcctggtcaccgtccccgtctacccgacctcc
tcggccttccagacccgctggatcctccagaacgccggcgtcaaggcgctcgccgtggag
agtgccgaacaggccgccgccctcggccccgaacgcgaccggctccccgacctcgcccac
ctctggtccttcgccacctcccccaaggacccgatcggcgacctcggccgcctcaaggag
gccgggggcgcgatccccgacgaggagatcacccggcgccgtaccgccctcaccccgcag
accaccgccaccctcatctacacctccggcaccaccggccgccccaagggctgcgtcctg
acccacggcaacttcttcgccgaggtcgacaacgccgtcgaactcctccaccccgtcttc
aagtcggtctccagggaacccgcctccaccctgctcttcctccccctctcgcacgtcttc
ggccgcatggtcgccatcggatgcctgcgcgcccgtgtccgcctcggccacgccccgagc
atcaggaccgaggacctcctcgccgacctcgccgccttccgcccgaccttcctcctcgcc
atcccctacgtcctggagaaggtcttcaacaccggccgcgccaccgccgagaagatgggc
cgcgccgcctccttcgaccgcgccgcccgcatcgcccgcgcctggggcgaggccaccgag
gcccagcagcacggtacgggccccggccccggcctcggtctgcgcaccgcccgcgcgctc
tacgacccgctggtctaccgccgcgtccgcgccgccctcggcggccgcgtccgctacgcc
atctgcggcggctcccccctcggccgccgcctcgccgccttctacgccggagcgggcatc
gagatcttcgaggggtacggcctcaccgagaccaccgccgccgccgtcgtcaccccgccg
ctcaaaccgcgcctcggcacggtcggctggcccctgcccggcggccgggtgcggatcgcc
gacgacggcgaggtgctcctcggcggcggccacgtcttcagcggctactgggacgccgag
accggcgaggtcacccgcggccccgtggacggctggttccccaccggtgacctcggtgcc
ctcgacgaggacggctacctcaccatcaccggccgcaagaaggacatcctcatcaccacc
ggcggcaagaacgtcgccccggcgccgctggaggactggctccgcgcccacccgctggtc
ggccagtgcatggtcgtcggcgacgaccgcccgtacatcacggcgctgctcaccctggag
ccggagggcatcgcgcactggcggaggatgcggaggaaggaggcgctgaccgccgcggaa
ctggcgcgtgacccggagctgctggaggcactccagaaggccgtggacgacgccaacaag
ctggtctcgcgtgccgagtcgatccgccgcttcaccgtgctcccggtcgacctcaccgag
gaggccggccacctcacgccgtccctgaagatcaagcgcccggccgtcgagcaggccttc
gccgaggagatcgaggcgctgtaccggaagtga
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