Streptomyces rutgersensis: F0345_20015
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Entry
F0345_20015 CDS
T08623
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug03420
Nucleotide excision repair
srug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0345_20015
03430 Mismatch repair
F0345_20015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srug03400
]
F0345_20015
Enzymes [BR:
srug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F0345_20015
DNA repair and recombination proteins [BR:
srug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0345_20015
MMR (mismatch excision repair)
Other MMR factors
F0345_20015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
C1_1
Helicase_Sgs1
DUF6011
Motif
Other DBs
NCBI-ProteinID:
QNE83118
LinkDB
All DBs
Position
4750361..4752541
Genome browser
AA seq
726 aa
AA seq
DB search
MTSAPHTTSFPHVPESADDVLTGLDPEQRAVATALHGPVCVLAGAGTGKTRALTHRIAYG
VRTNRFQPTSVLAVTFTNRAAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGT
LPRLVERKAQLVAEAGAGCGIRLDRNQLRDVTGEIEWAKVTQTVPGDYAESVAKSRRDAP
RDPAETAQIYTRYEQLKRDRGVIDFEDVLLLTIGILQDRRDIADHVRAQYQHFVVDEYQD
VSPLQQRLLELWLGDRDSLCVVGDASQTIYSFTGATPEHLLNFRVRHPEATVVKLVRDYR
STPQIVHLANGLLSRARGRAADHRLELVSQRDTGPEPQHIEYGDEPSEAEGTARRIRDLI
AAGVPAGEIAVLFRTNGQSGLYEQALTDAGVPYQLRGAERFFERREVREAQAALRGAARF
GGNDAALDLADSLSAQVRAVLSASGWSAQAPVGSGASRDRWESLAALARLADDFGAARPD
ALLADFVTELDERAASQHPPTVQGVTLASLHAAKGLEWDAVFLVGLTEGMMPITYARTDE
QLEEERRLLYVGITRARYRLTLSWALSRAPGGRAHRVPSRFLKDLRGTPATRGASSASVA
GTGGDAGVAGPRRRSRTPVRCRSCGRSLTDAGEMKLMRCEGCPSDMDEGVHDRLHAWRAA
EAERLGQPGYCVFTDKTLMAIAEQLPEEEAELIRIAGVGMRKFRRYGAEVLAICAGHEGV
GEGAES
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
gtgacatccgcaccgcacaccacttccttcccgcacgtcccggaatcggccgacgacgtg
ctcacaggcctggaccccgagcagcgcgccgtggccacggcactgcacgggccggtgtgc
gtgctggccggagcgggcaccggcaagacccgggccctgacccaccgcatcgcctacgga
gtgcggaccaaccgcttccagcccaccagcgtcctcgccgtcaccttcaccaaccgggcc
gccggcgagatgcgcggccgcctccgccaactcggcgccggcggggtacaggcccgcacc
ttccactccgccgccctgcgtcagctccagtacttctggccgaaagccgtcggggggacg
ctcccgcgcctggtcgaacgcaaagcccaactcgtcgccgaagcgggcgcgggctgcggc
atccgcctcgaccgcaaccagctccgggacgtgaccggggagatcgagtgggccaaggtc
acccagaccgtccccggcgactacgcggagagcgtcgccaagagccggcgcgacgccccc
cgcgaccccgccgagaccgcccagatctacacgcgctacgagcagctcaaacgggaccgg
ggtgtcatcgacttcgaggatgtcctgctcctgaccatcggcatcctccaggaccggcgg
gacatcgccgaccacgtccgcgcccagtaccagcacttcgtcgtcgacgagtaccaggac
gtcagccccctccagcagcgactcctcgaactctggctcggcgaccgcgacagcctctgc
gtcgtcggcgacgccagccagacgatctactcgttcaccggagccacccccgagcacctg
ctgaacttccgcgtccgccaccctgaggcgaccgtggtcaagctggtccgcgactaccgc
tccacaccgcagatcgtgcacctggccaacggactgctctcccgggcccgtggccgcgcc
gccgaccaccggctggaactcgtctcccagcgggacaccggacccgaaccccagcacatc
gagtacggcgacgaaccgtccgaggcggagggcaccgcccgccgcatccgcgacctcatc
gccgccggcgtccccgccggcgagatcgccgtgctcttccgcaccaacgggcagtccggt
ctctacgagcaggcactcaccgacgcgggcgtcccctaccagctccggggagcagagcgg
ttcttcgaacggcgggaggtccgtgaggcccaggccgccctgcgcggcgccgcccgcttc
ggaggcaacgacgcggcactcgacctggccgacagcctctccgcccaggtacgggccgtc
ctctccgcctccggctggagcgcgcaggcccccgtcggctccggagcctcccgggaccgc
tgggagtccctggccgcgctcgcccgcctcgccgacgacttcggcgcggcccggccggac
gccttgctcgccgacttcgtcacggaactggacgagcgcgccgcgtcccagcaccccccc
accgtccagggcgtcaccctcgcctcactgcacgccgccaagggcctcgaatgggacgcc
gtcttcctggtcgggctcaccgagggcatgatgccgatcacctacgcccgcacggacgaa
cagctggaggaggaacgccgcctgctctacgtgggcatcacccgggcccgctacaggctg
acgctctcctgggcgctctcccgcgcacccggcgggcgggcccaccgcgtaccgagccgc
ttcctgaaggacctgcgcggaacaccggcgacgaggggggcgtcctccgcctccgtcgcc
ggtacgggcggggacgcgggcgttgccgggcctcgccggaggtccaggacgccggtcagg
tgccgtagctgcggcagaagcctcaccgacgccggcgagatgaagctgatgcgctgcgaa
ggctgcccctcggacatggacgaaggagtccacgaccggttgcacgcctggcgcgcggcc
gaggcggagcggctgggccagcccggctactgcgtcttcaccgacaagaccctgatggcc
atcgccgagcagctgcccgaggaggaggcggagctgatccgcatcgccggcgtcggcatg
cggaagttccgccggtacggcgccgaagttctcgccatctgcgcaggtcacgaaggcgtg
ggcgagggggccgagagctga
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