Streptomyces rutgersensis: F0345_20675
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Entry
F0345_20675 CDS
T08623
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug00300
Lysine biosynthesis
srug00470
D-Amino acid metabolism
srug01100
Metabolic pathways
srug01110
Biosynthesis of secondary metabolites
srug01120
Microbial metabolism in diverse environments
srug01230
Biosynthesis of amino acids
Module
srug_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F0345_20675 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F0345_20675 (lysA)
Enzymes [BR:
srug01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F0345_20675 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNE83228
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All DBs
Position
4901777..4903168
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHGDVLPEGHYSAPAEDLNALDPKVWARTVRRDEDGALSVGGLPVTRLAE
EFGTPAFFLDESDFRARCRAWREAFGSEADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELATALDAGMPAARIAFHGNNKTPAEIRRAVEAGVGRIVLDSFEEIVRVAHIADELGVRQ
PVQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGS
QIFDMAGFEVSARRVVRLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALG
EIVTRECEAAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYTVSLASRTSDAGPMLVRVVGKHCESGDIVVRDAFLPADVAPGDLLAVPATGA
YCRSMASNYNHALRPPVVAVDEGSARVVVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcccaccccgccgggccccgccacggcgacgtcctgcccgagggccac
tacagcgcccccgccgaggacctcaacgccctcgaccccaaggtgtgggcgcgtaccgtc
cgccgcgacgaggacggcgcactgagcgtcggcgggctgccggtgacccggctcgccgag
gagttcggcacccccgccttcttcctcgacgagagcgacttccgggcccgctgccgcgcc
tggcgcgaggccttcggcagcgaggccgacgtcttctacgccggcaaggccttcctctcc
cgcgccgtcgtgcgctggctgcacgaggaggggctcaacctcgacgtctgctccggcggt
gaactggccaccgcgctggacgccgggatgccggccgcccggatcgccttccacggcaac
aacaagacgcccgccgagatccgccgggccgtcgaggcgggcgtcggccggatcgtgctg
gactccttcgaggagatcgtccgcgtcgcgcacatcgccgacgaactgggcgtgcgccag
ccggtgcagatccgggtcacggtcggcgtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcatcgcgctggccggcggccaggccgccgaggcggtc
cgccgggcgctgaagctcgacgggctggaactcatcggcatccactcgcacatcggctcg
cagatcttcgacatggccggtttcgaggtctccgcgcgccgcgtcgtgcgactgctcgcc
gaggtccgcgacgagcacggcgtcgaactccccgagatcgacctcggcggcggcctcggt
atcgcgtacacctccgacgacgatccgcgcgagccgcacgagatcgccaaggcgctcggc
gagatcgtcacccgtgagtgcgaggccgccgggctcgccaccccgcgcatctcggtggag
ccgggccgcgcgatcgtcgggccgaccgccttcacgctgtacgaggtggggaccgtcaag
ccgttggagggcctgcggacgtacgtctcggtcgacggcgggatgtcggacaacatccgc
acggcgctctacgacgccgagtacaccgtctcgctcgcctcgcgcacctccgacgccggg
ccgatgctggtacgggtggtcggcaagcactgtgagagtggcgacatcgtggtgcgcgac
gcgttcctcccggcggacgtcgcgccgggtgacctgctcgccgtgccggccaccggcgcc
tactgccgctccatggccagcaactacaaccacgcgttgcgaccgcccgtggtcgcggtg
gacgagggctcggcacgggttgtcgtgcgccgggagacggaggaggatctcctgcggctc
gatgtcggctga
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