Streptomyces rutgersensis: F0345_22415
Help
Entry
F0345_22415 CDS
T08623
Name
(GenBank) HAMP domain-containing protein
Organism
srug
Streptomyces rutgersensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
IcmF-related_N
DUF4795
GAF_3
OKR_DC_1_N
UPF0242
Motif
Other DBs
NCBI-ProteinID:
QNE83528
UniProt:
A0A7G7C7G2
LinkDB
All DBs
Position
5318639..5324041
Genome browser
AA seq
1800 aa
AA seq
DB search
MDAAQLQRLKSALAAMRDGNFRRRLTVTGDGVMAEVAALFNEVADRNLHLTGELSRVRRT
VGREGKLTERLETGVCEGSWASAIEASNALVDDLVHPVSEVGRVLSAVADGDLEQRMELR
TQAPDGSGHPLRGEFLKVGRTVNNLVDQLSRFTDEVTRVASEVGTEGKLGGQAQVRGMSG
SWKDLTDSVNTMAYRLTAQVRDIALVTTAVARGDLSRKVTVHVAGEMLELKNTVNTMVDQ
LSSFSSEVTRVAREVGTEGELGGQAQVPGVDGVWKDLTDSVNLMASNLTAQVRGIAEVTT
AVANGDLSRKVTVSARGEVAQLAETINQMTETLRTFADEVTRVAREVGVEGQLGGQANVP
GAAGTWKDLTDSVNTVFRNLTTQVRDIAQVTTAVANGDLSQKVTVDVSGEMLELKNTVNT
MVDQLSAFGAEVTRVAREVGVEGELGGQATVQGAAGTWKDLTDSVNTAFRNLTGQVRNIA
QVTTAVANGDLSQKVTVDVSGEMLQLKNTVNRMVDQLSSFADQVTRMARDVGTEGRLGGQ
AQVDGVSGTWKELTDSVNLMAGNLTAQVRQIAQVTTAVAQGDLSQKIGMDARGEILELKN
TINTMVDQLSAFADEVTRVAREVGTEGRLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQV
RQIAQVATAIARGDLSQKIDVDARGEILELKNTLNTLVDQLSAFAEQVTRVSREVGTEGI
LGGQARVDGVSGTWKDLTQSVNSMANNLTMQVRNIAEVTTAVARGDLSKKITVDAKGEIL
ELVTTVNTMVDQLSNFAEQVTLVAREVGTEGNLGGQARVPGVTGIWKDLSDNVNTMANNL
TGQVRNIAHVATAVANGDLTKKVTVEASGEVAQLADTVNTMVTTLSSFADEVTRVAREVG
TDGILGGQARVPGVSGTWKDLTESVNSMASNLTGQVRNIAMVTTAIAKGDLTKKIDIDAR
GEILELKTTINTMVDQLSSFAEQVTRVAREVGTEGQLGGQARVRDVDGTWRDLTESVNEM
AQNLTRQVRAIAAVATAVTRGDLQLKIDVDAAGEIQALQDNINTMITNLRDTTLANKEQD
WLKGNLARISGLMQGRRDLTDVASLIMSELTPVVSAQHGAFFIAAPTEEDPDPSAEARED
AYELRMIGSYGYSMGSMPTAFKPGESLIGAAAQEKRTIMVDHVPTGYLKIASGLGEAPPA
HVIVLPLLFEGTVLGVIELAAFQQFTHIQRDFLSQLAEMIATSVNTISVNTKTEELLKQS
QELTEQLRDRSEELEVRQMALQDSNAELEEKAELLARQNRDIEVKNTEIEDARQVLEERA
EQLAVSMRYKSEFLANMSHELRTPLNSLLILAKLLADNAEGNLSPKQVEFAETIHGAGSD
LLQLINDILDLSKVEAGKMDVSPTRIALVQLVDYVEATFRPLTAEKGLDFSVRVSPELPA
TLHTDEQRLLQVLRNLLSNAVKFTDSGAVELVIRPAAADVPDAIREQLLEAGSLADADAD
LIAFSVTDTGIGIAAGKMRVIFEAFKQADGTTSRKYGGTGLGLSISREIARLLGGEIHAA
SEPGRGSTFTLYLPLHPAELPPQGYAQLAPAVEPKGELPAGEEPRSTEPVPTEPLKDTRN
GPVSLFRRRRRAAEAAAAAGAEGAGGPGQQPRTTSLGRPLDAPPEERPARAPVNFDGQKV
LIVDDDIRNVFALTSVLEQHGLAVLYAENGREGIEVLEQHDDIAVVLMDIMMPEMDGYAT
TSAIRRMPQFAGLPIVALTAKAMKGDREKAIESGASDYVTKPVDPDHLLAVMEGWMSEGD
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcggcccagctccagcgcctgaagtcggccctggccgcgatgcgggacggcaac
ttccggcgccgtctgacggtgaccggcgacggagtgatggccgaggtcgccgccctgttc
aacgaggtcgcggaccgtaatctgcatctgaccggggaactgtcgcgggtacggcgcacg
gtcgggcgtgagggaaaactcacggagcggctggagaccggggtctgcgagggctcctgg
gcgtcggcgatcgaggcgtccaacgctctcgtcgacgacctggtccaccccgtgtccgag
gtgggccgggtactctccgcggtcgccgacggtgacctggagcagcggatggagctgcgg
acgcaggccccggacggctccgggcatccgttgcgcggggagttcctgaaggtcggccgg
acggtgaacaacctggtcgaccagttgtcgcggttcaccgacgaggtgacccgggtggcc
agcgaggtcggcaccgagggcaagctcggcgggcaggcgcaggtgcggggcatgtccggg
tcgtggaaggacctcacggactccgtcaacaccatggcgtaccggctcaccgcgcaggtg
cgggacatcgcgctggtgaccacggcggtggcccgcggcgacctgtcccgcaaggtgacg
gtgcacgtcgcgggcgagatgctcgaactcaagaacaccgtcaacacgatggtggaccag
ctgtcgtcgttctcctccgaggtgacccgggtcgcccgcgaggtgggcaccgagggtgag
ctgggcgggcaggcgcaggtgcccggtgtggacggggtgtggaaggacctcaccgactcg
gtgaacctcatggcctccaacctcaccgcgcaggtccgagggatcgccgaggtgacgacg
gccgtggccaacggtgacctgtcgcgcaaggtgacggtcagcgcacgcggtgaggtcgcc
caactcgccgagaccatcaaccagatgaccgagacactgcggaccttcgccgacgaggtg
acgcgcgtggcccgcgaggtcggcgtcgagggacagctgggcgggcaggccaacgtaccg
ggcgccgccggcacctggaaggacctgaccgactccgtcaacacggtcttccggaacctg
accacgcaggtgcgcgacatcgcgcaggtgaccacggcggtggccaacggcgacctgtcg
cagaaggtcaccgtggacgtctccggcgagatgctggagctgaagaacaccgtcaacacc
atggtcgaccagctctcggcgttcggtgccgaggtgacccgggtggcgcgggaggtcggc
gtcgagggcgagctggggggccaggccaccgtgcagggggcggccggcacctggaaggac
ctcaccgactcggtgaacaccgccttccgcaacctcaccggccaggtgcgcaacatcgcg
caggtgaccacggcggtggccaacggcgacctgtcgcagaaggtcacggtcgacgtctcc
ggcgagatgctgcaactgaagaacaccgtgaaccgcatggtggaccagctctcctccttc
gccgaccaggtcacgcggatggcccgggacgtgggcacggagggccggctcggcggccag
gcgcaggtggacggggttagcggcacctggaaggaactgaccgactccgtcaacctcatg
gcgggcaacctcaccgcccaggtgcggcagatcgcccaggtcaccacggcggtggcccag
ggcgacctgtcgcagaagatcggcatggacgcccggggcgagatcctggagctgaagaac
accatcaacacgatggtcgaccagctctccgccttcgccgacgaggtgacccgggtcgcc
cgggaggtgggcaccgagggccggctcggcggccaggcgcaggtgcccggcgtggccggt
gtctggcgcgacctgaccgactcggtgaacggcatggccggcaatctcaccgcgcaggtc
cgccagatcgcccaggtggccaccgccatcgcccgcggtgacctgtcgcagaagatcgac
gtggacgcccggggcgagatcctggagctgaagaacaccctgaacacgctggtggaccag
ctctcggccttcgccgagcaggtcacccgcgtctcccgcgaggtcggtaccgagggcatc
ctcggcggccaggcccgggtcgacggggtctccggcacctggaaggacctcacccagtcg
gtgaacagcatggccaacaacctgaccatgcaggtccgcaacatcgccgaggtcaccacg
gcggtggcccgcggcgacctctccaagaagatcaccgtcgatgccaagggcgagatcctc
gaactggtcaccaccgtcaacacgatggtcgaccagctctccaacttcgccgagcaggtg
accctggtcgcccgcgaggtgggcaccgagggcaacctcggcggccaggcgcgggtgccg
ggcgtcaccggcatctggaaggacctgagcgacaacgtcaacacgatggcgaacaacctc
accgggcaggtgcggaacatcgcccacgtggccaccgcggtggccaacggcgacctgacc
aagaaggtcaccgtcgaggcgagcggcgaggtcgcccagctcgccgacaccgtcaacacc
atggtgacgaccctgtcgtcgttcgccgacgaggtgacccgcgtcgcccgcgaggtgggc
accgacggcatcctcggcggccaggcccgcgtccccggcgtctcggggacctggaaggac
ctgaccgagtcggtgaactcgatggcctccaacctcaccggccaggtccgcaacatcgcg
atggtcaccaccgccatcgccaagggcgacctgaccaagaagatcgacatcgatgcccgg
ggcgagatcctggagctgaagacgaccatcaacaccatggtcgaccagctctcctccttc
gcggagcaggtcacccgggtcgcccgtgaggtgggcaccgaggggcagctcggcggtcag
gcccgggtccgggacgtcgacggcacctggcgcgacctcaccgagtcggtgaacgagatg
gcgcagaacctcacccgccaggtccgcgccatcgcggcggtcgccaccgcggtcacccgc
ggtgacctccagctcaagatcgacgtggacgccgcgggcgagatccaggcgctccaggac
aacatcaacacgatgatcaccaacctgcgcgacaccaccctcgccaacaaggagcaggac
tggctcaagggcaacctcgcgcggatctccggcctcatgcagggccgccgcgacctcacc
gacgtcgcctcgctgatcatgagcgagctgaccccggtggtctccgcgcagcacggcgcg
ttcttcatcgccgcgcccaccgaggaggacccggacccgtcggcggaggcccgcgaggac
gcgtacgagctgcggatgatcgggagttacgggtactcgatggggtcgatgcccaccgcg
ttcaagcccggcgagtcgctgatcggggccgccgcgcaggagaagcggaccatcatggtc
gaccacgtgcccaccgggtacctgaagatcgcctcggggctcggggaggcaccgcccgcc
catgtgatcgtgctgccgctgctcttcgagggcaccgtgctcggcgtgatcgaactggcc
gccttccagcagttcacccacatccagcgggacttcctcagccagctcgccgagatgatc
gcgaccagcgtcaacaccatcagcgtcaacaccaagaccgaggagctgctgaagcagtcg
caggagctgaccgagcagctgcgggaccgttcggaggagctggaggtccggcagatggcg
ttgcaggactccaacgccgaactggaggagaaggccgagctgctggcccggcagaaccgc
gacatcgaggtcaagaacaccgagatcgaggatgcccggcaggtgctggaggagcgtgcc
gagcagctcgccgtctccatgcggtacaagtcggagttcctcgccaacatgtcgcacgag
ctgcgcaccccgctcaactcgctgctgatcctcgccaagctgctcgccgacaacgccgag
gggaacctctccccgaagcaggtcgagttcgccgagaccatccacggcgccggttcggac
ctgctccagctcatcaacgacatcctcgacctctccaaggtcgaggcgggcaagatggac
gtcagtccgacccggatcgcgctggtccagctcgtggactacgtggaggccaccttccgg
ccgctcaccgccgagaagggcctggacttctccgtccgggtctccccggagctgcccgcc
accctgcacaccgacgagcagcggctcctccaggtcctgcgcaacctcctgtccaacgcg
gtgaagttcaccgacagcggcgccgtcgagctggtcatccggccggccgcggcggacgtg
ccggacgcgatcagggagcagttgctggaggccggttcgctcgccgacgccgacgccgac
ctcatcgccttctccgtcaccgacaccggcatcggtatcgcggcgggcaagatgcgggtc
atcttcgaggcgttcaagcaggccgacggcaccaccagccgcaagtacggcggtaccggg
ctcggcctctccatcagccgcgagatcgcccgcctgctcggcggcgagatccacgcggcg
agcgaaccgggccgtggttccaccttcacgctctacctgccgctgcacccggccgagctg
ccccctcaggggtacgcgcagctcgccccggccgtcgagcccaagggcgagctgccggcg
ggggaggagccccggagcaccgagccggtgcccacggagccgctgaaggacacccgcaac
gggcccgtctccctcttccgccggcgccgcagggccgccgaggcggccgccgccgccggg
gcggagggtgccggcgggcccgggcagcagccccgcaccacctcgctgggcaggccgctg
gacgcgccgccggaggagcgcccggcccgtgcgccggtgaacttcgacggccagaaggtc
ctcatcgtcgacgacgacatccgtaacgtcttcgccctcaccagcgtcctcgaacagcac
ggcctggcggtgctctacgccgagaacggccgcgagggcatcgaggtgctggagcagcac
gacgacatcgccgtggtcctgatggacatcatgatgccggagatggacgggtacgcgacc
acctcggcgatccggcgtatgccgcagttcgcggggctgccgatcgtcgcgctgaccgcc
aaggcgatgaagggcgaccgggagaaggcgatcgagtcgggtgcctccgactacgtcacc
aagccggtcgaccccgaccacctgctggcggtcatggagggatggatgagcgagggcgac
tga
DBGET
integrated database retrieval system