Streptomyces rutgersensis: F0345_27435
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Entry
F0345_27435 CDS
T08623
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srug
Streptomyces rutgersensis
Pathway
srug00521
Streptomycin biosynthesis
srug00523
Polyketide sugar unit biosynthesis
srug00525
Acarbose and validamycin biosynthesis
srug00541
Biosynthesis of various nucleotide sugars
srug01055
Biosynthesis of vancomycin group antibiotics
srug01100
Metabolic pathways
srug01110
Biosynthesis of secondary metabolites
srug01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
srug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F0345_27435 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F0345_27435 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
F0345_27435 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F0345_27435 (rfbB)
00525 Acarbose and validamycin biosynthesis
F0345_27435 (rfbB)
Enzymes [BR:
srug01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
F0345_27435 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QNE84380
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All DBs
Position
complement(6553104..6554093)
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AA seq
329 aa
AA seq
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MRGRTPALLVTGGAGFIGSHFVRSLLAGAYPRWAGASVTVLDKLGYCGNLENLAPVAGHP
GFRFVRGEVEDTVLLDQVVPGHDHVVHFAAESHVDRSIDGAGPFAVTNVLGTQRLLDAAL
RHGVRRFLQVSTDEVYGSTDEGAWTEEQPLAPRSPYAATKAAADLLALAWHTTYGLDVVV
TRCSNNFGPYQYPEKMVPRFVTNLLRDRRVPLYGDGSHVRDWVHVDDHCRGVASALERGR
AGQVYHLGGGCELSNRELTGRILRACGAGWEMVENVADRRGHDRRYALDISKSTAELGYA
PRVGFDEGLLQTLTWYRANRSWWERLVGD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggcgaaccccagcgctgctggtgaccggaggagccgggttcatcgggtcgcac
ttcgtgcgctccctcctggcgggcgcgtatccgcggtgggccggcgcgagcgtgaccgtg
ctggacaaactgggctactgcggaaacctggagaacctcgctcccgtggccggccacccc
ggattccgtttcgtccggggcgaggtggaggacacggtcctgctcgaccaggtcgtaccc
ggccacgatcacgtggtgcacttcgccgccgagtcccatgtggaccggtccatcgacggg
gcggggccgttcgccgtgaccaacgtgctcggcacccagcgcctgctcgacgcggcactg
cggcacggcgtccggcgcttcctccaggtgtcgacggacgaggtgtacggctccacggac
gagggggcgtggaccgaggagcagcccctggcaccgaggtcgccctacgcggccaccaag
gccgccgccgatctgctcgcgctcgcctggcacaccacgtacgggctcgacgtggtcgtc
acccgctgctccaacaacttcggcccctaccagtacccggagaagatggtcccgcgcttc
gtgaccaacctgctccgggaccggcgcgtcccgctgtacggcgacggctcgcacgtcagg
gactgggtgcacgtggacgaccactgccgcggcgtggcctcggccctcgaacggggcagg
gcggggcaggtctaccacctcggcggcggctgcgaactgagcaaccgtgagctgaccggg
cgcatcctgcgggcgtgcggcgcgggctgggagatggtcgagaacgtcgccgaccggcgg
ggccacgaccggcgttacgccctggacatctccaagtcgaccgcggaactcggctacgcc
ccgcgcgtcgggttcgacgaggggctgttgcagacactcacctggtatcgcgcgaaccgc
tcctggtgggagcggctcgtcggcgactga
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