Streptococcus ruminicola: GPZ88_03605
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Entry
GPZ88_03605 CDS
T08901
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
srum
Streptococcus ruminicola
Brite
KEGG Orthology (KO) [BR:
srum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srum03400
]
GPZ88_03605 (radA)
DNA repair and recombination proteins [BR:
srum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GPZ88_03605 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
DUF7125
Lon_C
AAA_22
Rad51
AAA_16
nSTAND3
GvpD_P-loop
nSTAND_NTPase5
AAA_14
AAA
ABC_tran
SLFN-g3_helicase
TniB
AAA_24
NTPase_1
NACHT
KdpD
divDNAB
AAA_5
MCM
DUF7129
DUF3843
KTI12
Motif
Other DBs
NCBI-ProteinID:
QIM46221
UniProt:
A0A6G8HZM5
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All DBs
Position
complement(707404..708765)
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AA seq
453 aa
AA seq
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MAKKKTTFICQECGYHSPKYLGRCPNCSSWTSFVEEVEVQEVKNARVSLTGEKSKPTKLK
DVSSINYSRTKTGMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSIQLAEKGTVLY
VSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAIRAQIEQIQPDFLIIDSIQTIMSPDI
SGVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGQLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGS
RPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVK
LDEPAIDLAVAVAIASSYKEKPTNPQEAFIGEIGLTGEIRRVTRIEQRINEAAKLGFTKV
YAPKNSLVGIDMPSSIEVVGVTTVGEVLKKVFK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atcgctaagaagaaaacaacgtttatttgtcaggagtgtggctatcattctcctaaatat
ctaggacgttgtccaaactgttcatcttggacgtcttttgttgaagaagtcgaagtacaa
gaggttaaaaatgcgcgtgtcagtttgacaggtgaaaagagcaaaccaactaagttgaag
gacgttagctcgattaattattcacgcacaaagactggcatggatgaatttaaccgcgtg
ctcggtggcggtgtggtgccaggtagtctggtgcttatcggtggtgacccaggtatcggg
aaatcaacgcttcttttgcaggtttcgattcaactggcagagaaaggaacggttctttac
gtttctggtgaagaatcagctgagcagattaaacttcgcagtgaacgccttggcgacatt
gataatgaattttacctttatgctgagacaaatatgcaagctatccgtgcgcagattgag
caaatccagcctgatttcttgattattgactcgattcaaacgattatgagtcctgatatt
tcaggagtccaaggttcggtatctcaagtgcgtgaagtgacggcagagctcatgcagttg
gctaagactaataacatcgcaaccttcatcgttggtcacgtgactaaggaagggcagctt
gctggtccacgtatgcttgagcatatggtggatacggtgctttattttgagggtgaacgc
catcatactttccgtatcttgcgtgcagtgaaaaaccgttttggttcaactaacgaaatc
ggcatttttgaaatgcaatctggtgggctggttgaagtgcttaatccgagccaagttttc
ttggaagaacgcttggatggagcgactggttcagctatcgtggtaaccatggaaggtagt
cgtccgattttggcggaggttcaagctttggtgaccccaacggtctttggaaatgccaaa
cgcacaacgacaggtcttgattttaaccgagtcagcttgattatggcggtgcttgaaaaa
cgttgtgggcttttgttgcaaaatcaagatgcttatctcaagtcagctggtggggtgaaa
cttgatgaaccagcgattgacttggcagtagcggtagctattgcgtcaagctacaaagaa
aagccgacaaatccacaagaagctttcatcggtgaaattggtttgacaggtgaaattcgt
cgcgtcactcgtattgaacaacgtatcaatgaagcagctaagcttggctttacaaaagtt
tacgcaccgaaaaattctttagttggtatcgatatgccatcatctattgaagttgttggt
gtgacaactgttggtgaagttcttaagaaagtttttaaatag
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