Streptococcus ruminicola: GPZ88_03705
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Entry
GPZ88_03705 CDS
T08901
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
srum
Streptococcus ruminicola
Pathway
srum03030
DNA replication
srum03410
Base excision repair
srum03420
Nucleotide excision repair
srum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GPZ88_03705 (polA)
03410 Base excision repair
GPZ88_03705 (polA)
03420 Nucleotide excision repair
GPZ88_03705 (polA)
03440 Homologous recombination
GPZ88_03705 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srum03032
]
GPZ88_03705 (polA)
03400 DNA repair and recombination proteins [BR:
srum03400
]
GPZ88_03705 (polA)
Enzymes [BR:
srum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GPZ88_03705 (polA)
DNA replication proteins [BR:
srum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GPZ88_03705 (polA)
DNA repair and recombination proteins [BR:
srum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GPZ88_03705 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GPZ88_03705 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Vta1
Motif
Other DBs
NCBI-ProteinID:
QIM46239
UniProt:
A0A6G8HZF2
LinkDB
All DBs
Position
complement(724458..727094)
Genome browser
AA seq
878 aa
AA seq
DB search
MENKKKLLLIDGSSVAYRAFFALYNQIDRFKNRAGLHTNAIYGFHLMLNHLLERIQPTHV
LVAFDAGKTTFRTEMYKDYKAGRAKTPDEFREQLPYIREMLTALGIKWYELENYEADDII
GTLDKLAENEDEYDVTIVSGDKDLIQLADNNTTVEISKKGVAEFEEFTPAYLMEKMGITP
KQFIDLKALMGDKSDNIPGVTKVGEKTGLKLLLEYGSLEGVYENIDGMKKSKMKENLIND
KEQAFLSKTLATINITAPIAIGLDDIDYTGPDLEKLVPFYDEMGFKQFKDNLGAAKKQEK
FDVTYTEVDSLSADMFTDDQFFYFEILGDNYHVESIIGFAWGNDKAIYASTNLELLKDDL
FKAALAKPIKTYDFKRSKVLLSHLGIDLPAPAFDSRLAKYLLSTVDDNELSTIARLYTEY
VLDSDEAVYGKGVKRAVPDKAVLLSHLARKIVVLNHSEKVMLDKLTEHQQASLLFDMEQP
LANVLAKMEIAGISVKKETLQEMEKANQAVIDNLTQEIYDLAGMEFNINSPKQLGELLFE
KMQLPTSYTKKTKTGYSTAVDVLERLAPISPIVSKILEYRQIAKLQSTYIVGLQDFILKD
GKIHTRYLQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPETADEVLLSSDYSQIEL
RVLAHISNDEHLIAAFREGADIHTSTAMRVFGIEKAEDVTPNDRRNAKAVNFGIVYGISD
YGLANNLGIPRKVAKQYIETYFERYPGIKDYMERVVRDAKDKGYVETLFHRRRELPDINA
RNFNVRQFAERTAINSPIQGSAADILKIAMINLDKALVEGKFKTKMLLQVHDEIILEVPK
DELEAIEKLVKETMESAIELSVPLVADESAGQTWYEAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagaaaaaattattattaatcgatgggtcatctgtagcttatcgtgccttt
ttcgcactgtataatcagattgatcgttttaaaaaccgagcaggtcttcatacaaatgcc
atttacggttttcaccttatgctcaatcacttattagaaagaattcagccaacgcatgtt
ttggttgcttttgatgctggtaagacaacttttcgtacagaaatgtacaaagattacaaa
gctggtcgtgccaaaacaccagatgaattccgtgagcagttgccatacatccgtgaaatg
ttaacagcgcttggtatcaagtggtatgaattggaaaattatgaagctgatgacatcatc
ggaactttggataaattagcagagaacgaagatgaatatgatgtaaccatcgtcagcgga
gataaagaccttatccaacttgcggataacaacacaaccgttgagatttctaaaaaaggt
gtcgctgagtttgaagaattcactccagcttatctcatggaaaaaatgggcatcacgcca
aaacaatttatcgacctaaaagccctcatgggtgataaatctgataacattccaggtgtt
actaaggtcggtgaaaagacaggtcttaaacttctcttagagtacggcagtcttgaaggt
gtttatgaaaacatcgacggcatgaagaaatctaagatgaaagaaaacttgattaacgat
aaagaacaagctttcttgtctaagactttggcgacaatcaatatcactgctccgattgcg
attggtttagatgatatcgactacactggacctgatttggaaaaacttgtgccattttat
gatgaaatgggattcaaacagtttaaagataatcttggtgctgctaagaaacaagaaaaa
tttgatgtgacctacactgaagtggacagtttgagtgcagacatgttcacagatgaccaa
tttttctattttgaaatcttgggtgataattatcacgttgaaagcatcattggctttgct
tggggaaatgacaaggctatctatgcttcaacaaatcttgaacttctaaaagatgatttg
tttaaagcagcgttagctaaaccaatcaaaacttacgatttcaaacgtagcaaagttctt
cttagtcatttaggtattgatttgccagcgccagcatttgatagtcgcttagcaaaatac
cttttatcaaccgttgatgataatgaactgtcaaccattgctcgtttatacacagagtat
gtccttgatagcgatgaagctgtttacggtaagggtgttaaacgtgctgtcccagataaa
gcagtgctgctcagccatttagcgcgtaagattgtggttttgaaccattctgaaaaagtc
atgctagataagttgacagagcatcaacaagcaagccttctttttgacatggaacaacct
ctagcaaatgttcttgctaagatggaaattgcgggtatttcagttaaaaaagaaacgctc
caagaaatggaaaaagccaaccaagcagtcattgacaacttgacacaagaaatctatgac
cttgctggtatggaatttaacattaactcgccaaaacaattgggtgaactgctctttgaa
aagatgcaattgccaacaagctacactaagaaaaccaagactggttattcaacagcagtt
gatgttttggaacgcttggcaccaatctcaccaatcgtatctaagattttggaataccgc
caaatcgcaaaactccaatcaacttacatcgttggtttgcaagatttcatcttaaaagac
ggaaaaattcatactcgctaccttcaagatttgacgcagacaggacgtttgtctagtgtt
gatcctaacttgcaaaatattccagtgcgtttggaacaagggcgcttgattcgtaaggca
tttgtcccagaaacagcagacgaagtactattaagctctgactattcacaaatcgagtta
cgtgtacttgctcacatttcaaatgatgaacatttgattgcggctttccgtgagggagca
gatatccacacgtcaacagccatgcgtgtctttggtatcgaaaaagctgaagacgtcaca
ccaaatgaccgtcgtaacgccaaagctgttaacttcggtattgtttacggtatttctgat
tacggtcttgctaataaccttggtattccgcgtaaagtggcaaaacaatacattgagact
tacttcgaacgctacccaggtattaaagactacatggagcgcgtggtgcgtgatgccaaa
gataaaggctatgttgaaacgctcttccaccgtcgtcgcgaattgccagatatcaatgct
cgtaacttcaacgtgcgtcaatttgctgagcgtacagccattaactcgccaattcaaggt
agcgcagccgacattctcaaaattgctatgattaaccttgataaagctttagttgaaggt
aaattcaagacaaaaatgcttctacaagtgcacgatgaaatcatccttgaagtgccaaaa
gacgagctagaagctattgaaaaattagtcaaagaaaccatggaatcagccatcgaactt
tctgtcccacttgtggcagacgaaagtgcaggccaaacatggtacgaagcaaaataa
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