Streptococcus ruminicola: GPZ88_04860
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Entry
GPZ88_04860 CDS
T08901
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srum
Streptococcus ruminicola
Pathway
srum03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GPZ88_04860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srum03021
]
GPZ88_04860
03400 DNA repair and recombination proteins [BR:
srum03400
]
GPZ88_04860
Enzymes [BR:
srum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GPZ88_04860
Transcription machinery [BR:
srum03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GPZ88_04860
DNA repair and recombination proteins [BR:
srum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GPZ88_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Mg_chelatase_C
SusF_SusE
Motif
Other DBs
NCBI-ProteinID:
QIM46423
UniProt:
A0A6G8HZT7
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All DBs
Position
941586..942524
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AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNIKGLAVKSYVDDEKIIELDVEGPAEVTAGDILTDSDVEIVN
PDHYLFTIAEGHSLKATMTVAKKRGYVPAEGNKKEDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKNTDVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaga
tttgttatcgaaccacttgaacgtggatacggtacaactctaggtaattctcttcgtcgt
gtactcttgtcttcactcccaggtgcggcagtaacatcaattaaaattgatggagtactc
cacgaatttgacactattccaggtgtacgcgaagatgttatgcaaatcatccttaatatt
aaaggacttgcagtaaaatcttatgttgatgatgaaaaaattatcgaacttgacgttgaa
ggtccagcagaagttactgccggggatattttaactgatagtgatgttgaaatcgtcaac
ccagaccactatctctttacaatcgctgaaggacacagtttgaaagcaacaatgactgtt
gctaaaaaacgtggttacgttccagccgaaggtaataaaaaagaagatgctccagtggga
acattggctgtagactctatctacacaccagtgaaaaaagttaattatcaagttgaacct
gctcgtgtaggtagcaatgacggctttgataaattaacaatcgaaatcatgacaaatggc
acaatcattcctgaagatgctttaggtctatcagcacgcgttttgattgaacacttgaat
ctgtttactgaccttacagaagtggctaaaaacactgacgtaatgaaagaaactgaaaaa
gttaacgatgaaaaagtgcttgaccgtactatcgaagaacttgatttgtcagtccgctca
tataactgtcttaaacgtgcaggtatcaacactgtatttgatttgacagaaaaaactgag
cctgaaatgatgaaagtccgtaaccttggtcgtaagagccttgaagaagtcaaagttaaa
cttgctgatcttggactcggactcaaaaacgataaataa
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