Streptococcus ruminicola: GPZ88_06520
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Entry
GPZ88_06520 CDS
T08901
Name
(GenBank) PASTA domain-containing protein
KO
K12556
penicillin-binding protein 2X
Organism
srum
Streptococcus ruminicola
Pathway
srum00550
Peptidoglycan biosynthesis
srum01100
Metabolic pathways
srum01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
srum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GPZ88_06520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GPZ88_06520
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srum01011
]
GPZ88_06520
Peptidoglycan biosynthesis and degradation proteins [BR:
srum01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GPZ88_06520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
DUF2500
DUF5859
Motif
Other DBs
NCBI-ProteinID:
QIM46703
UniProt:
A0A6G8I0L4
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Position
1262487..1264751
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AA seq
754 aa
AA seq
DB search
MKKLMNRFLDYVVKDRRTPDKNRERVGQNLMILAVFLFFVFIINFAIIVGTDTKFGHNLS
KEASDVYQQTVTVQAKRGTIYDRNGVALAEDSTTYSVYAIISKSYVSTTGEKLYVKKSQY
DKVAEILNAQIGIDKDEVLKQLNQSGLFQVSFGSSGSGLSYSKKSEIETAMKDAGIKGIG
FESTPGRMYPNGVFASQFLGLAQLKENKDGKTSSLVGTSGLEASLNDVLSGSDGKVTYQK
DKNGNLLLGTETTVKRAVDGKDVYTTLSEPLQSYLESQMDIFQNDAQGKYASATVVNAKT
GEILATTQRPTYNAQTMEGYNEDNLKTWNTLLYQSYYEPGSTIKVMTLASAIDDGIFTPN
EVISTINGITVADTKINDWNVNEGNTSVQYMTYAQGFAWSSNVAMTSLEQKMGNDKWLNY
LSKFKFGYPTRFGMVNEGSGLLPSDNEVTIAMSAFGQGIGVTQVQMLRAFSAISNKGVML
EPQFISQIYDPNNNTARKASAEISGKPVSENAANQTLDYMVTVGTDSQFGTLYDSTEGAP
VIQVGDYSVAVKSGTAQIAASAEEGGGYLTGDNDYINSVVAMVPSDDPDFIMYVTLQQPT
TTFKRSFWKDVVNPVLERAMMIKDTLTSTAVTGTDTETKYQLKDYIGKAPGDTAQELRNN
LVQPVVVGSGSKIKKMSKKVGSNLSQNEQVLLWTGKLKTMPDMYGWTKENVEKFAKWTGI
KVTIKGSGSKVTKQSVDTGKDIDKVKKIKITLGD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaatgaatcgttttttagactatgtggtaaaggacagacgcacacccgat
aagaatcgcgagcgtgttggtcaaaatctgatgattttggcagtcttccttttctttgtg
tttattatcaatttcgcgattattgtgggaacagataccaagtttggtcataatttatct
aaagaagcctcagatgtttaccaacaaacagtgacggttcaagccaaacgtggtacgatt
tatgaccgtaatggtgttgcactggctgaggattcgacaacttatagtgtttatgctatt
atttcgaaatcttatgtgtcaacaactggtgaaaaactctacgttaaaaaatctcaatac
gataaagttgctgagattttgaatgcccaaatcggtattgataaagacgaagtcttaaaa
caattgaatcaaagtgggcttttccaagtgtcattcggaagttcagggtctggtttatca
tacagtaagaaatcagaaattgaaacagctatgaaggacgctggaattaagggaattgga
tttgaatcaacacctggacgtatgtatccaaatggtgtctttgcttcgcaattcttagga
cttgcccaattaaaagaaaacaaagatggtaaaacatcaagccttgtcggaacatcaggt
ttagaagcctcattaaacgatgtgctatcagggtcagacggaaaagtaacctatcaaaaa
gataaaaatggtaacttgttacttggtacggaaacgactgttaaacgtgctgttgatgga
aaagatgtctacacaacactttctgaaccattgcaatcttatcttgagtcacaaatggat
attttccaaaatgatgctcaaggtaaatatgccagtgcgacagtggttaatgctaagaca
ggagaaatcttagcaacgacacaacgtccaacttataatgcacagacaatggaaggttat
aatgaagataacctaaaaacatggaatacccttctatatcaaagctattatgaaccaggg
tcaaccataaaagtaatgacacttgcctcagctatcgatgatggtatttttacgccaaat
gaagtgatttcaacaatcaacggtattacagttgctgatacaaaaatcaatgactggaac
gtcaatgaaggtaatacttctgttcaatatatgacatatgctcaagggtttgcttggtca
agtaacgttgctatgacaagtcttgaacaaaaaatgggtaatgacaaatggctaaactac
ttgtctaagtttaagtttggttacccaacacgttttggtatggtcaatgaaggtagtggc
ttgttaccatcagacaatgaagtaaccattgccatgagtgctttcggtcaaggtattggt
gtgacacaagttcaaatgcttcgtgccttttctgcgatttctaataaaggggttatgctt
gaaccacaatttattagtcaaatttacgacccaaataataatacagcccgtaaagcgtca
gctgaaatctctggtaaacctgtctcagaaaatgctgctaatcaaacacttgattacatg
gtaacggttggtacagattcacaatttggtaccttgtatgatagcacggaaggggcaccg
gttattcaagtcggtgattactctgttgccgtcaaatctggtacagcccaaattgccgca
tctgctgaagagggcggaggatatttgactggtgataatgactacatcaactcagttgtt
gctatggtaccatcagatgatcctgactttattatgtacgttacccttcaacaaccaaca
acaaccttcaaacgttctttctggaaagatgtggttaatcctgttcttgaacgtgctatg
atgattaaggatactttgacaagtacagccgtgactggtacagatacagaaaccaaatac
caattgaaagattatattggaaaagcacctggtgataccgctcaggaacttcgtaataat
cttgttcaaccagttgtcgttggatcaggtagcaaaattaagaaaatgtctaaaaaagtc
ggtagcaacctttcacaaaatgaacaagtgctactttggacaggaaaattaaaaacaatg
ccagacatgtatggctggacgaaagaaaatgttgaaaaatttgcgaagtggactggaatc
aaagtaaccattaaaggctctggttcaaaagtcactaagcaaagtgtcgataccggaaaa
gatattgacaaagtcaaaaaaattaaaattactttaggagactaa
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